RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MXD4Q14582 209 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 IRGCQ6NXR0 463 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PRMT9Q6P2P2 845 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 COLGALT2Q8IYK4 626 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LRRC17Q8N6Y2 441 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 S100PBPQ96BU1 408 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PNPLA8Q9NP80 782 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LINC00854A0A1B0GVQ3 168 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ADCY6O43306 1168 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 IFNA16P05015 189 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TCF4P15884 667 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ALOX15P16050 662 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 MYL12AP19105 171 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 FGFR2P21802 821 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 EIF3EP60228 445 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 ALCAMQ13740 583 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 QPRTQ15274 297 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TTC39BQ5VTQ0 682 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 NELFCDQ8IXH7 590 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SETD9Q8NE22 299 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 STK33Q9BYT3 514 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 CUEDC1Q9NWM3 386 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 PCDHGA10Q9Y5H3 936 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 AQRO60306 1485 aaKnown RBP eCLIP6.43□□□□□ -1.38
VCAN-203ENST00000343200 PARP4Q9UKK3 1724 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 CCDC154A6NI56 674 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 HNRNPDLO14979 420 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 STX11O75558 287 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ATP5BP06576 529 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 ARF4P18085 180 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 ABL2P42684 1182 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 MDH1BQ5I0G3 518 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 DSTYKQ6XUX3 929 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 MARK2Q7KZI7 788 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 EIF3MQ7L2H7 374 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 KRT26Q7Z3Y9 468 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TTC30AQ86WT1 665 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LPIN2Q92539 896 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SLC9A6Q92581 669 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 FAR2Q96K12 515 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PLEKHA5Q9HAU0 1116 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ZNF224Q9NZL3 707 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ABCG2Q9UNQ0 655 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PCDHA5Q9Y5H7 936 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ATAD2BQ9ULI0 1458 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 KATNA1O75449 491 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 RASA1P20936 1047 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PAX3P23760 479 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SPIRE1Q08AE8 756 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 KCTD21Q4G0X4 260 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PREPLQ4J6C6 727 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 AMER2Q8N7J2 671 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SPATA4Q8NEY3 305 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 MATN2O00339 956 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 MDM4O15151 490 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TUFMP49411 452 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 PGDP52209 483 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 RAB15P59190 212 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 RIPPLY1Q0D2K3 151 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 STX4Q12846 297 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 LRRC14Q15048 493 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 MIGA2Q7L4E1 593 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 P2RX5Q93086 422 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PPP1R2P1Q96PQ5 205 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SPATA16Q9BXB7 569 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SLC39A2Q9NP94 309 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 DMTF1Q9Y222 760 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SRRM3A6NNA2 597 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 GFPT2O94808 682 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 STXBP2Q15833 593 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PYHIN1Q6K0P9 492 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TDRD5Q8NAT2 981 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 DENND6BQ8NEG7 585 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 KCTD4Q8WVF5 259 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TLR7Q9NYK1 1049 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 AKAP7Q9P0M2 348 aaPredicted RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 SBNO2Q9Y2G9 1366 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PDCD11Q14690 1871 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 CACNA1GO43497 2377 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TRPM1Q7Z4N2 1603 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SETD1AO15047 1707 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 M0QZ92 97 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 SNAPC5O75971 98 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ZNF12P17014 697 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 F8A1P23610 371 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 RHAGQ02094 409 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PTGDRQ13258 359 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 GDPD5Q8WTR4 605 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 COX4I2Q96KJ9 171 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 FICDQ9BVA6 458 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 TUBGCP6Q96RT7 1819 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 LRRIQ4A6NIV6 560 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ROR1Q01973 937 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 CBX3Q13185 183 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 PABPC1LQ4VXU2 614 aaKnown RBP6.42□□□□□ -1.38
VCAN-203ENST00000343200 WASHC2DQ5SRD0 308 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 ARHGEF19Q8IW93 802 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 CENPTQ96BT3 561 aa6.42□□□□□ -1.38
VCAN-203ENST00000343200 DSN1Q9H410 356 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms