RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 FKBP3Q00688 224 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CTXN3Q4LDR2 81 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 OVOS1Q6IE37 1185 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RSPO2Q6UXX9 243 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LIMS2Q7Z4I7 341 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PALB2Q86YC2 1186 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TMEM86AQ8N2M4 240 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TMEM130Q8N3G9 435 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 KREMEN2Q8NCW0 462 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CCDC127Q96BQ5 260 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RIPOR3Q96MK2 946 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 USP15Q9Y4E8 981 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CYB561D2O14569 222 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SLC16A3O15427 465 aaKnown RBP14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ADAM12O43184 909 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 HNRNPA1P09651 372 aaKnown RBP eCLIP14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ATF2P15336 505 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MTHFRP42898 656 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ROR1Q01973 937 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SMARCB1Q12824 385 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CEP135Q66GS9 1140 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 LMBRD2Q68DH5 695 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GPR149Q86SP6 731 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 METTL23Q86XA0 190 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TOP6BLQ8N6T0 577 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PLEKHO2Q8TD55 490 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZNF516Q92618 1163 aa14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 POP1Q99575 1024 aaKnown RBP14.08□□□□□ -0.16
HLA-DQA1-201ENST00000343139 BICDL2A1A5D9 508 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PPP1R3GB7ZBB8 358 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZMYND10O75800 440 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 C4BPAP04003 597 aaKnown RBP14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 KRT19P08727 400 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 KRT13P13646 458 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 IL9P15248 144 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GTF2H1P32780 548 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 BFSP1Q12934 665 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CBX2Q14781 532 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CLUL1Q15846 466 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CAMK4Q16566 473 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ATAT1Q5SQI0 421 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ANKRD40Q6AI12 368 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CCDC149Q6ZUS6 474 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ADHFE1Q8IWW8 467 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 FAM186BQ8IYM0 893 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ADAMTS19Q8TE59 1207 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 HPDLQ96IR7 371 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 HSFX1Q9UBD0 423 aa14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 AFF4Q9UHB7 1163 aaKnown RBP14.07□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ANK1P16157 1881 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 HUS1O60921 280 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CD44P16070 742 aaKnown RBP14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 VAMP7P51809 220 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GPR17Q13304 367 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZACNQ401N2 412 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 LIN9Q5TKA1 542 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TAF4BQ92750 862 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SYAP1Q96A49 352 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CEP63Q96MT8 703 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PHF7Q9BWX1 381 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 NUP62CLQ9H1M0 184 aa14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TIMM13Q9Y5L4 95 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQA1-201ENST00000343139 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 GABRDO14764 452 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 STX10O60499 249 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MBD3O95983 291 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 EPB41P11171 864 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 LHX1P48742 406 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PMS1P54277 932 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TRPC3Q13507 836 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 C1orf220Q5T0J3 134 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 RARS2Q5T160 578 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TDRD10Q5VZ19 366 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TTI2Q6NXR4 508 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 MLKLQ8NB16 471 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 UHRF1Q96T88 793 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ACBD6Q9BR61 282 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 XYLT2Q9H1B5 865 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 L1RE1Q9UN81 338 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 VWA8A3KMH1 1905 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CCDC195A0A1B0GUA6 201 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 BIN1O00499 593 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 TACC1O75410 805 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 C8AP07357 584 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 DLG4P78352 724 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ZP2Q05996 745 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 PAK1Q13153 545 aa14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 CT47A1Q5JQC4 288 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQA1-201ENST00000343139 ISM2Q6H9L7 571 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms