RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 IQCKQ8N0W5 287 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 THOC1Q96FV9 657 aaKnown RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 APOBEC3GQ9HC16 384 aaKnown RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 SNX9Q9Y5X1 595 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 LGR5O75473 907 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 GHRP10912 638 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 GNA15P30679 374 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 CPT1AP50416 773 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 CAP1Q01518 475 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 NOGQ13253 232 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 HASPINQ8TF76 798 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 LPPQ93052 612 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 ACAP3Q96P50 834 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 KLHL11Q9NVR0 708 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 RBBP6Q7Z6E9 1792 aaKnown RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 CYP11B1P15538 503 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 SLC26A2P50443 739 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 YARSP54577 528 aaKnown RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 FAM182AQ5T1J6 154 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 ZC3H3Q8IXZ2 948 aaKnown RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 RBBP8NLQ8NC74 664 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 FAM49BQ9NUQ9 324 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 PRMT7Q9NVM4 692 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 ETAA1Q9NY74 926 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.89□□□□□ -0.19
COL18A1-201ENST00000342220 KIAA0754O94854 1291 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ZNF865P0CJ78 1059 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 HIC1Q14526 733 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 TMEM40Q8WWA1 233 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ITFG2Q969R8 447 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 C18orf25Q96B23 403 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 TOMM70O94826 608 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 GTF2H1P32780 548 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 NSFP46459 744 aaKnown RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 SKOR1P84550 965 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ZNF667Q5HYK9 610 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 CYP4A22Q5TCH4 519 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ARMC3Q5W041 872 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 AADACL2Q6P093 401 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ABRAQ8N0Z2 381 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 HEXIM2Q96MH2 286 aaKnown RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 SPATS2LQ9NUQ6 558 aaKnown RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 TRIM17Q9Y577 477 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 BZW2Q9Y6E2 419 aaKnown RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 VNN1O95497 513 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 CRYMQ14894 314 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 CCDC50Q8IVM0 306 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 OTUD6BQ8N6M0 293 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 TRPV1Q8NER1 839 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 KIF9Q9HAQ2 790 aa13.88□□□□□ -0.19
COL18A1-201ENST00000342220 TIMM13Q9Y5L4 95 aaPredicted RBP13.88□□□□□ -0.19
COL18A1-201ENST00000342220 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 BUB1BO60566 1050 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 ASGR1P07306 291 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 CUL2Q13617 745 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 PSMD6Q15008 389 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 ZACNQ401N2 412 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 PREPLQ4J6C6 727 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 MORN1Q5T089 497 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 ZNF483Q8TF39 744 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 HVCN1Q96D96 273 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 ST6GALNAC4Q9H4F1 302 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 TRMT13Q9NUP7 481 aaKnown RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 RLFQ13129 1914 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 GRAP2O75791 330 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 KIF4AO95239 1232 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 TNNC1P63316 161 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.196e-6■□□□□ 11.2
COL18A1-201ENST00000342220 TAB3Q8N5C8 712 aaPredicted RBP13.87□□□□□ -0.19
COL18A1-201ENST00000342220 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 EPS8L1Q8TE68 723 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 LPIN3Q9BQK8 851 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
COL18A1-201ENST00000342220 RGS7P49802 495 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 GUCY1A3Q02108 690 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 TMEM132DQ14C87 1099 aa13.86□□□□□ -0.19
COL18A1-201ENST00000342220 KCNA10Q16322 511 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms