RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 C12orf50Q8NA57 414 aaPredicted RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 TARS2Q9BW92 718 aaKnown RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 APOBEC3GQ9HC16 384 aaKnown RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 SLC12A6Q9UHW9 1150 aa15.99■□□□□ 0.15
TPM3-208ENST00000341485 NOVA2Q9UNW9 492 aaKnown RBP15.99■□□□□ 0.15
TPM3-208ENST00000341485 A6NJR5 290 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 NDUFAB1O14561 156 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 CLDN3O15551 220 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 CYP1A1P04798 512 aaPredicted RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 RRM1P23921 792 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 TMOD1P28289 359 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 KCNJ1P48048 391 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 GRIK4Q16099 956 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 MFSD14CQ5VZR4 134 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 LLGL2Q6P1M3 1020 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 RNF25Q96BH1 459 aaPredicted RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 RBAKQ9NYW8 714 aaPredicted RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 ZSWIM8A7E2V4 1837 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 DCDC2CA8MYV0 355 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 FSCN2O14926 492 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 SHBGP04278 402 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 PRKCBP05771 671 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 GJB1P08034 283 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 FNTAP49354 379 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 CPT1AP50416 773 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 APLP1P51693 650 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 EIF3BP55884 814 aaKnown RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 IFFO1Q0D2I5 559 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 LLGL1Q15334 1064 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 MAPK6Q16659 721 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 MTHFD1LQ6UB35 978 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 CCDC105Q8IYK2 499 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 ZNF668Q96K58 619 aaPredicted RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 RUNDC3BQ96NL0 473 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 MRPL4Q9BYD3 311 aaKnown RBP15.98■□□□□ 0.15
TPM3-208ENST00000341485 GABRQQ9UN88 632 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 AKT3Q9Y243 479 aa15.98■□□□□ 0.15
TPM3-208ENST00000341485 CFHP08603 1231 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 NUDT17P0C025 328 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 AKR1A1P14550 325 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 GBP1P32455 592 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 FLT3LGP49771 235 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 BPIFB4P59827 614 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 PPP2R2AP63151 447 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 PPARDQ03181 441 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 CENPCQ03188 943 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 CUL2Q13617 745 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 C2CD6Q53TS8 623 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 MON1BQ7L1V2 547 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 CYFIP2Q96F07 1278 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 CGRRF1Q99675 332 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 MSTO1Q9BUK6 570 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 PABPC3Q9H361 631 aaKnown RBP15.97■□□□□ 0.15
TPM3-208ENST00000341485 LRRC19Q9H756 370 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 PTPN22Q9Y2R2 807 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 Q9Y3F1 56 aa15.97■□□□□ 0.15
TPM3-208ENST00000341485 CNTNAP2Q9UHC6 1331 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 A0A0B4J269 797 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 LDHAP00338 332 aaKnown RBP15.96■□□□□ 0.15
TPM3-208ENST00000341485 MYL3P08590 195 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 MYBL1P10243 752 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 SEC24CP53992 1094 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 MAGOHP61326 146 aaKnown RBP15.96■□□□□ 0.15
TPM3-208ENST00000341485 SP3Q02447 781 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 TMEM132AQ24JP5 1023 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 UBAP2Q5T6F2 1119 aaKnown RBP15.96■□□□□ 0.15
TPM3-208ENST00000341485 TLCD1Q96CP7 247 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 TRIM11Q96F44 468 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 CCDC113Q9H0I3 377 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 PARP2Q9UGN5 583 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 PCDHB4Q9Y5E5 795 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 UMODL1Q5DID0 1318 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 RRN3P2A6NIE6 340 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 SRRM3A6NNA2 597 aaPredicted RBP15.96■□□□□ 0.15
TPM3-208ENST00000341485 INO80B-WBP1J3KQ70 363 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 CAND2O75155 1236 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 IGHA2P01877 340 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 NSFP46459 744 aaKnown RBP15.96■□□□□ 0.15
TPM3-208ENST00000341485 PRKCZQ05513 592 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 SCARA3Q6AZY7 606 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 ZPBP2Q6X784 338 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 NLRP14Q86W24 1093 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 OR5B17Q8NGF7 314 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 C1orf54Q8WWF1 131 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 ART4Q93070 314 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 HERPUD2Q9BSE4 406 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 INO80BQ9C086 356 aaPredicted RBP15.96■□□□□ 0.15
TPM3-208ENST00000341485 RASSF4Q9H2L5 321 aa15.96■□□□□ 0.15
TPM3-208ENST00000341485 EVPLQ92817 2033 aa15.96■□□□□ 0.14
TPM3-208ENST00000341485 F2P00734 622 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 CLTAP09496 248 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 HARSP12081 509 aaKnown RBP15.95■□□□□ 0.14
TPM3-208ENST00000341485 SSTR3P32745 418 aaPredicted RBP15.95■□□□□ 0.14
TPM3-208ENST00000341485 PHKA2P46019 1235 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 SEZ6Q53EL9 994 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 ODF2Q5BJF6 829 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms