RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 TARBP2Q15633 366 aaKnown RBP15.43■□□□□ 0.06
TDP2-201ENST00000341060 SWT1Q5T5J6 900 aaKnown RBP15.43■□□□□ 0.06
TDP2-201ENST00000341060 IZUMO3Q5VZ72 239 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 HIBCHQ6NVY1 386 aaPredicted RBP15.43■□□□□ 0.06
TDP2-201ENST00000341060 BRSK2Q8IWQ3 736 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 DYDC1Q8WWB3 177 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 ADCY3O60266 1144 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 FAM189A1O60320 539 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 CDH16O75309 829 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 ASS1P00966 412 aaKnown RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 CETN2P41208 172 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 SSR1P43307 286 aaKnown RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 MNAT1P51948 309 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 RPL7AP62424 266 aaKnown RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 FSTL1Q12841 308 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 PRAMEF18Q5VWM3 479 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 DRICH1Q6PGQ1 229 aaPredicted RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 ZPBP2Q6X784 338 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 WDR49Q8IV35 697 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 RCOR2Q8IZ40 523 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 FUKQ8N0W3 1084 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 KLRG1Q96E93 195 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 FAM212AQ96EL1 285 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 RBM41Q96IZ5 413 aaKnown RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 PWWP2AQ96N64 755 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
TDP2-201ENST00000341060 FOXP3Q9BZS1 431 aa15.42■□□□□ 0.06
TDP2-201ENST00000341060 TMEM191CA6NGB0 347 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 SNX3O60493 162 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 GJB6O95452 261 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 LSM8O95777 96 aaKnown RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 CALB1P05937 261 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 GSTA1P08263 222 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 TMEM191BP0C7N4 346 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 UBA1P22314 1058 aaKnown RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 CNTN2Q02246 1040 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 MCL1Q07820 350 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 ZNF252P-AS1Q0IIN9 211 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 GRM1Q13255 1194 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 LRRC14Q15048 493 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 SEZ6Q53EL9 994 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 SEPT14Q6ZU15 432 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 CEP128Q6ZU80 1094 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 APOBEC3FQ8IUX4 373 aaKnown RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 ZCCHC9Q8N567 271 aaKnown RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 CCHCR1Q8TD31 782 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 SLITRK1Q96PX8 696 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 PCYT2Q99447 389 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 SLC12A4Q9UP95 1085 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 TCRBV5S1A1TA0A578 114 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 LIASO43766 372 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 FARP2O94887 1054 aaPredicted RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 ALDH5A1P51649 535 aaPredicted RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 STAT4Q14765 748 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 P3H1Q32P28 736 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 LRRC38Q5VT99 294 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 ANGEL2Q5VTE6 544 aaKnown RBP15.41■□□□□ 0.06
TDP2-201ENST00000341060 SCARA3Q6AZY7 606 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 CYB5D1Q6P9G0 228 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 GSTA5Q7RTV2 222 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 SGSM3Q96HU1 749 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 EURLQ9NYK6 297 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 AFG3L2Q9Y4W6 797 aa15.41■□□□□ 0.06
TDP2-201ENST00000341060 GSTTP1A0A1W2PQM5 241 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 ATP2C2O75185 946 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 TOM1L1O75674 476 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 CST3P01034 146 aaPredicted RBP15.4■□□□□ 0.06
TDP2-201ENST00000341060 ABHD2P08910 425 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 CETPP11597 493 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
TDP2-201ENST00000341060 TCF4P15884 667 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 TNFSF9P41273 254 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 GTF2A1P52655 376 aaPredicted RBP15.4■□□□□ 0.06
TDP2-201ENST00000341060 ANKRD35Q8N283 1001 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 MGARPQ8TDB4 240 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.068e-7■■■□□ 15.9
TDP2-201ENST00000341060 CCDC77Q9BR77 488 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 NRBP2Q9NSY0 501 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 HAUS2Q9NVX0 235 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 ACTL7BQ9Y614 415 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 TTLL13PA6NNM8 815 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 MSCO60682 206 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 MAFO75444 373 aaPredicted RBP15.4■□□□□ 0.06
TDP2-201ENST00000341060 TJP3O95049 919 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 BRAFP15056 766 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 EFNA5P52803 228 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 COPS2P61201 443 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 ATP13A4Q4VNC1 1196 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 NOL9Q5SY16 702 aaKnown RBP15.4■□□□□ 0.06
TDP2-201ENST00000341060 CYP4X1Q8N118 509 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 CKAP2Q8WWK9 683 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 C9orf72Q96LT7 481 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 MCEEQ96PE7 176 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 MTMR12Q9C0I1 747 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 FGFR1OP2Q9NVK5 253 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms