RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
VAPA-201ENST00000340541 ZMYND10O75800 440 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 OAZ2O95190 189 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 CYP2J2P51589 502 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 TFAMQ00059 246 aaKnown RBP16.63■□□□□ 0.25
VAPA-201ENST00000340541 ROR1Q01973 937 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 PNOCQ13519 176 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 SNRNP35Q16560 246 aaKnown RBP16.63■□□□□ 0.25
VAPA-201ENST00000340541 TMEM105Q8N8V8 129 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 XXYLT1Q8NBI6 393 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 APPL2Q8NEU8 664 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 SENP8Q96LD8 212 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
VAPA-201ENST00000340541 KIAA1586Q9HCI6 787 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 ZDHHC7Q9NXF8 308 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 TIMM13Q9Y5L4 95 aaPredicted RBP16.63■□□□□ 0.25
VAPA-201ENST00000340541 DOCK6Q96HP0 2047 aa16.63■□□□□ 0.25
VAPA-201ENST00000340541 WDR27A2RRH5 827 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 H7C4K7 107 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 GFRA3O60609 400 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 ABLIM3O94929 683 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 TYMPP19971 482 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 PAX3P23760 479 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 CTXN3Q4LDR2 81 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 DSTYKQ6XUX3 929 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 OR5B17Q8NGF7 314 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 SMOC2Q9H3U7 446 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 INTS13Q9NVM9 706 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 DMAC2Q9NW81 257 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
VAPA-201ENST00000340541 EPS15L1Q9UBC2 864 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 WNT16Q9UBV4 365 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 SIX4Q9UIU6 781 aa16.62■□□□□ 0.25
VAPA-201ENST00000340541 PDXKO00764 312 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 ITGB3P05106 788 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 CYP11A1P05108 521 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 POLR2BP30876 1174 aaKnown RBP16.61■□□□□ 0.25
VAPA-201ENST00000340541 NBL1P41271 181 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 TAF6P49848 677 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 YWHAHQ04917 246 aaPredicted RBP16.61■□□□□ 0.25
VAPA-201ENST00000340541 CYP24A1Q07973 514 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 SURF1Q15526 300 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 LMBRD2Q68DH5 695 aaPredicted RBP16.61■□□□□ 0.25
VAPA-201ENST00000340541 ZNF280DQ6N043 979 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 SLC9A9Q8IVB4 645 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 RDH13Q8NBN7 331 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 ZNF461Q8TAF7 563 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 SPATA20Q8TB22 786 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
VAPA-201ENST00000340541 PRKD2Q9BZL6 878 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 MTMR12Q9C0I1 747 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 USP34Q70CQ2 3546 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 CLUHO75153 1309 aa16.61■□□□□ 0.25
VAPA-201ENST00000340541 ZFHX2Q9C0A1 2572 aaPredicted RBP16.6■□□□□ 0.25
VAPA-201ENST00000340541 C8AP07357 584 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 AOC1P19801 751 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 HOXA9P31269 272 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 PSMD6Q15008 389 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 WDR49Q8IV35 697 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
VAPA-201ENST00000340541 SLC7A14Q8TBB6 771 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 PLEKHO2Q8TD55 490 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 SMG7Q92540 1137 aaKnown RBP16.6■□□□□ 0.25
VAPA-201ENST00000340541 ERCC4Q92889 916 aaPredicted RBP16.6■□□□□ 0.25
VAPA-201ENST00000340541 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
VAPA-201ENST00000340541 FAM86C1Q9NVL1 165 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 ITGA11Q9UKX5 1188 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 AGAP1Q9UPQ3 857 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 TRAF3IP3Q9Y228 551 aa16.6■□□□□ 0.25
VAPA-201ENST00000340541 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
VAPA-201ENST00000340541 NOTCH4Q99466 2003 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 DOCK8Q8NF50 2099 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 KPNA7A9QM74 516 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 EXOC3O60645 756 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 N4BP1O75113 896 aaKnown RBP16.59■□□□□ 0.25
VAPA-201ENST00000340541 VNN2O95498 520 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 HNRNPA1P09651 372 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■□□□ 11.6
VAPA-201ENST00000340541 ODC1P11926 461 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 ATF2P15336 505 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 NPR3P17342 541 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
VAPA-201ENST00000340541 ARPP19P56211 112 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 UVSSAQ2YD98 709 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 OVOS1Q6IE37 1185 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 ELOA2Q8IYF1 753 aaPredicted RBP16.59■□□□□ 0.25
VAPA-201ENST00000340541 SMYD4Q8IYR2 804 aaPredicted RBP16.59■□□□□ 0.25
VAPA-201ENST00000340541 SLC44A3Q8N4M1 653 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 CSGALNACT2Q8N6G5 542 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 CCDC34Q96HJ3 373 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 FBXL21Q9UKT6 434 aa16.59■□□□□ 0.25
VAPA-201ENST00000340541 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms