RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 NPAS4Q8IUM7 802 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 FNIP1Q8TF40 1166 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 PKNOX2Q96KN3 472 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 MRPL47Q9HD33 250 aaKnown RBP7.66□□□□□ -1.18
NUP43-201ENST00000340413 RRAGDQ9NQL2 400 aaPredicted RBP7.66□□□□□ -1.18
NUP43-201ENST00000340413 CTAGE9A4FU28 777 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 CTNNA2P26232 953 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 POLR2BP30876 1174 aaKnown RBP7.66□□□□□ -1.18
NUP43-201ENST00000340413 WNT7BP56706 349 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 MYL6P60660 151 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 PPP2R5EQ16537 467 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 CCDC122Q5T0U0 273 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 CNKSR3Q6P9H4 555 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 CTNNBL1Q8WYA6 563 aaPredicted RBP7.66□□□□□ -1.18
NUP43-201ENST00000340413 ABCB6Q9NP58 842 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 SNTG2Q9NY99 539 aa7.66□□□□□ -1.18
NUP43-201ENST00000340413 MICAL3Q7RTP6 2002 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 M0QZQ0 153 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 CLSTN1O94985 981 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 TFAMQ00059 246 aaKnown RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 TUSC3Q13454 348 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 ZNF618Q5T7W0 954 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 TWF2Q6IBS0 349 aaKnown RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 DCLRE1AQ6PJP8 1040 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 LCLAT1Q6UWP7 414 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 BEND5Q7L4P6 421 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 CEP112Q8N8E3 955 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 NIPA2Q8N8Q9 360 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 TMEM35BQ8NCS4 154 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 PBKQ96KB5 322 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 EIF2AQ9BY44 585 aaKnown RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 RSAD1Q9HA92 442 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 PNPLA8Q9NP80 782 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 CISHQ9NSE2 258 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 HSFX1Q9UBD0 423 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 TBX21Q9UL17 535 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 PCDHB4Q9Y5E5 795 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 A0A087X0T9 212 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 GABRDO14764 452 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 THP07101 528 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 FAM228BP0C875 321 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 ZNF200P98182 395 aaPredicted RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 ELAVL2Q12926 359 aaKnown RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 FAM47CQ5HY64 1035 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 NOP9Q86U38 636 aaKnown RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 CRIPAKQ8N1N5 446 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 C1orf131Q8NDD1 294 aaKnown RBP7.65□□□□□ -1.18
NUP43-201ENST00000340413 TATDN2Q93075 761 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 TMEM176AQ96HP8 235 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 TNIP3Q96KP6 325 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 C11orf49Q9H6J7 331 aa7.65□□□□□ -1.18
NUP43-201ENST00000340413 ITGB3P05106 788 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 GNA15P30679 374 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 ACADSBP45954 432 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 DSC1Q08554 894 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 MAPRE1Q15691 268 aaKnown RBP7.65□□□□□ -1.19
NUP43-201ENST00000340413 RPUSD2Q8IZ73 545 aaKnown RBP7.65□□□□□ -1.19
NUP43-201ENST00000340413 C2orf15Q8WU43 125 aaKnown RBP7.65□□□□□ -1.19
NUP43-201ENST00000340413 C18orf25Q96B23 403 aaPredicted RBP7.65□□□□□ -1.19
NUP43-201ENST00000340413 POP1Q99575 1024 aaKnown RBP7.65□□□□□ -1.19
NUP43-201ENST00000340413 TRIM62Q9BVG3 475 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 NT5C1AQ9BXI3 368 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 PCDHB8Q9UN66 801 aa7.65□□□□□ -1.19
NUP43-201ENST00000340413 ABHD14A-ACY1A0A1B0GW23 586 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 ZNF487B1APH4 448 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 SYN3O14994 580 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 NOMO3P69849 1222 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 ZNF268Q14587 947 aaPredicted RBP7.64□□□□□ -1.19
NUP43-201ENST00000340413 MTF1Q14872 753 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 LRRC38Q5VT99 294 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 MON1BQ7L1V2 547 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 ACRBPQ8NEB7 543 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 MNS1Q8NEH6 495 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 EEF2KMTQ96G04 330 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 RUNDC3BQ96NL0 473 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 STXBP5LQ9Y2K9 1186 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 PTGESO14684 152 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 CST3P01034 146 aaPredicted RBP7.64□□□□□ -1.19
NUP43-201ENST00000340413 AMPD2Q01433 879 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 PLEKHA7Q6IQ23 1121 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 UBE2Q1Q7Z7E8 422 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 LRRC57Q8N9N7 239 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 WNT8BQ93098 351 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 NXF3Q9H4D5 531 aaKnown RBP7.64□□□□□ -1.19
NUP43-201ENST00000340413 AGAP1Q9UPQ3 857 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 HYOU1Q9Y4L1 999 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 PTPN7P35236 360 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 RAD23BP54727 409 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 MEI1Q5TIA1 1274 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 U2AF1L4Q8WU68 220 aaKnown RBP7.64□□□□□ -1.19
NUP43-201ENST00000340413 KCTD13Q8WZ19 329 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 WNT8AQ9H1J5 351 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 CDC23Q9UJX2 597 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 CDH9Q9ULB4 789 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.64□□□□□ -1.19
NUP43-201ENST00000340413 MRFAP1Q9Y605 127 aa7.64□□□□□ -1.19
NUP43-201ENST00000340413 FNDC1Q4ZHG4 1894 aaPredicted RBP7.64□□□□□ -1.19
NUP43-201ENST00000340413 PLXNA3P51805 1871 aa7.63□□□□□ -1.19
NUP43-201ENST00000340413 KPNA7A9QM74 516 aa7.63□□□□□ -1.19
NUP43-201ENST00000340413 DPYSL4O14531 572 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms