RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ZNF236Q9UL36 1845 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 NDUFAB1O14561 156 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MAGEB2O15479 319 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CAPN15O75808 1086 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CST3P01034 146 aaPredicted RBP11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MAGEA9P43362 315 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ASPAP45381 313 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TNFAIP2Q03169 654 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 KRT17Q04695 432 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MBTD1Q05BQ5 628 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TTLL4Q14679 1199 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 LY6KQ17RY6 165 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TTC39CQ8N584 583 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 OR2W6PQ8NHA6 318 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MYCBPAPQ8TBZ2 947 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 OSBPL8Q9BZF1 889 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 AAASQ9NRG9 546 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CISHQ9NSE2 258 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 WDR35Q9P2L0 1181 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 RSPH14Q9UHP6 348 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 SCN4AP35499 1836 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 RALGAPA2Q2PPJ7 1873 aa11.38□□□□□ -0.59
TRAF3IP2-201ENST00000340026 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MCF2P10911 925 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CBLBQ13191 982 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 IRF5Q13568 498 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ACAP1Q15027 740 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TAZQ16635 292 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 RNF149Q8NC42 400 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ANKRD36BP1Q96IX9 119 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 SERPINB12Q96P63 405 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 C11orf70Q9BRQ4 267 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ASB7Q9H672 318 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ERAP1Q9NZ08 941 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 GMNCA6NCL1 334 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 C22orf31O95567 290 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ABHD2P08910 425 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 HOXD8P13378 290 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TNFSF9P41273 254 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 GUCY1A3Q02108 690 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 SLC29A2Q14542 456 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 PPP1R7Q15435 360 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CCDC142Q17RM4 750 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ERMARDQ5T6L9 678 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 LDLRAD1Q5T700 205 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ATF7IP2Q5U623 682 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ZNF473Q8WTR7 871 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CNKSR2Q8WXI2 1034 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CCT8L2Q96SF2 557 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CYP3A43Q9HB55 503 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TXNRD2Q9NNW7 524 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 VTA1Q9NP79 307 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 NOVA2Q9UNW9 492 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MGAMO43451 1857 aa11.37□□□□□ -0.59
TRAF3IP2-201ENST00000340026 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 A0A087WUV0 522 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MED7O43513 233 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TNNC2P02585 160 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 KLRC2P26717 231 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CCT5P48643 541 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 C6orf89Q6UWU4 347 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MMS22LQ6ZRQ5 1243 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 P3H4Q92791 437 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 SEMA4AQ9H3S1 761 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ELP3Q9H9T3 547 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.597e-11■■■■■ 260.8
TRAF3IP2-201ENST00000340026 CHST7Q9NS84 486 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CEP83Q9Y592 693 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CAND2O75155 1236 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 CFHP08603 1231 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ATP5DP30049 168 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 POLR2BP30876 1174 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 GABRB2P47870 512 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TAS2R40P59535 323 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MYL6P60660 151 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 MAGOHP61326 146 aaKnown RBP11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 AMHR2Q16671 573 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 NKD2Q969F2 451 aaPredicted RBP11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 HERPUD2Q9BSE4 406 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 ACTL7BQ9Y614 415 aa11.36□□□□□ -0.59
TRAF3IP2-201ENST00000340026 TJP3O95049 919 aa11.35□□□□□ -0.59
TRAF3IP2-201ENST00000340026 RALAP11233 206 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms