RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PARD3BQ8TEW8 1205 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 GRK7Q8WTQ7 553 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 PSPC1Q8WXF1 523 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 GPRASP2Q96D09 838 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 XPO6Q96QU8 1125 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 HINFPQ9BQA5 517 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 TRIM51Q9BSJ1 452 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 CELF4Q9BZC1 486 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 PPP1R12CQ9BZL4 782 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 KDM4CQ9H3R0 1056 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 PLEKHA4Q9H4M7 779 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 BCAS3Q9H6U6 928 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 YY1AP1Q9H869 796 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 ERVK-5Q9HDB9 667 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 TAS2R14Q9NYV8 317 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 TCEAL9Q9UHQ7 104 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 NFASCO94856 1347 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 DLL1O00548 723 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 ADRB2P07550 413 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 CYP11B1P15538 503 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 COMTP21964 271 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 CYP2C18P33260 490 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 MAGOHP61326 146 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 CENPCQ03188 943 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 IFFO1Q0D2I5 559 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 DMP1Q13316 513 aaPredicted RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 MTMR1Q13613 665 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 SNRNP35Q16560 246 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 ARHGAP44Q17R89 818 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 RASIP1Q5U651 963 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 GKAP1Q5VSY0 366 aaPredicted RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 ACAD10Q6JQN1 1059 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 RHBDF2Q6PJF5 856 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 CCDC137Q6PK04 289 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 C15orf39Q6ZRI6 1047 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 TAOK1Q7L7X3 1001 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 NOP9Q86U38 636 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 MCPH1Q8NEM0 835 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 PLEKHO2Q8TD55 490 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 SYTL5Q8TDW5 730 aaPredicted RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 SLC20A1Q8WUM9 679 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 DDX1Q92499 740 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 RAPGEF5Q92565 580 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 MAGOHBQ96A72 148 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 CHMP6Q96FZ7 201 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 VCPIP1Q96JH7 1222 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 KREMEN1Q96MU8 473 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 ZNF317Q96PQ6 595 aaPredicted RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 CBWD1Q9BRT8 395 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 SEZ6LQ9BYH1 1024 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 NSRP1Q9H0G5 558 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 TBX20Q9UMR3 447 aa11.48□□□□□ -0.57
RTN3-201ENST00000338850 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
RTN3-201ENST00000338850 UMODL1Q5DID0 1318 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 ZBTB39O15060 712 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 LRRN2O75325 713 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 RASSF9O75901 435 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 DNAJC8O75937 253 aaPredicted RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 ECEL1O95672 775 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 PIGRP01833 764 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 ACRP10323 421 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 ITIH2P19823 946 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 DRD4P21917 467 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 HPDP32754 393 aaPredicted RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 RPL21P46778 160 aaKnown RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 GCLMP48507 274 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 LIG3P49916 1009 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 DLG4P78352 724 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 MRPS9P82933 396 aaKnown RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 PTK6Q13882 451 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 PGM5Q15124 567 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 CLEC16AQ2KHT3 1053 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 CCDC121Q6ZUS5 278 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 RIBC1Q8N443 379 aaPredicted RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 DNERQ8NFT8 737 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 FBXO25Q8TCJ0 367 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
RTN3-201ENST00000338850 KAT2BQ92831 832 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 CDHR1Q96JP9 859 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 UIMC1Q96RL1 719 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 PCDHB18PQ96TA0 734 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 PLCD4Q9BRC7 762 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 TRPV6Q9H1D0 765 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 DPH5Q9H2P9 285 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 HIPK3Q9H422 1215 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
RTN3-201ENST00000338850 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms