RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 IRS1P35568 1242 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 NCAPHQ15003 741 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 ZNF699Q32M78 642 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 CDKAL1Q5VV42 579 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 TOP6BLQ8N6T0 577 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 AUTS2Q8WXX7 1259 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 B3GALT6Q96L58 329 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 VRTNQ9H8Y1 702 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 RXFP1Q9HBX9 757 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 CBX8Q9HC52 389 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 NXF1Q9UBU9 619 aaKnown RBP12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 COQ4Q9Y3A0 265 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 TIMM13Q9Y5L4 95 aaPredicted RBP12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 BACE2Q9Y5Z0 518 aa12.79□□□□□ -0.36
SPTLC1-202ENST00000337841 FSD2A1L4K1 749 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 NCK2O43639 380 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 OAZ2O95190 189 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 ASS1P00966 412 aaKnown RBP12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 CYP11A1P05108 521 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 KLRC2P26717 231 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 LHX1P48742 406 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 ZNF445P59923 1031 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 MYL7Q01449 175 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 MRPL58Q14197 206 aaKnown RBP12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 IQCB1Q15051 598 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 PSMD5Q16401 504 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 CTXN3Q4LDR2 81 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 CBWD6Q4V339 395 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 CBWD3Q5JTY5 395 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 ZNF280DQ6N043 979 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 PPFIBP1Q86W92 1011 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 DHX40Q8IX18 779 aaKnown RBP12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 SPATA18Q8TC71 538 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 FAXDC2Q96IV6 333 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 XYLT2Q9H1B5 865 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
SPTLC1-202ENST00000337841 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 OR6C75A6NL08 312 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 HIDE1A8MVS5 230 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 ADH1AP07327 375 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 CNPP09543 421 aaKnown RBP12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 NDUFV1P49821 464 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 SOWAHAQ2M3V2 549 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 TCEAL5Q5H9L2 206 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 MICALL1Q8N3F8 863 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 SEMA4DQ92854 862 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 PI4K2AQ9BTU6 479 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 DNAI2Q9GZS0 605 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 VPS16Q9H269 839 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 TAB2Q9NYJ8 693 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 MTRRQ9UBK8 725 aa12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 LIMA1Q9UHB6 759 aaKnown RBP12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.37
SPTLC1-202ENST00000337841 CITO14578 2027 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 PER2O15055 1255 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 TEX28O15482 410 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 TACC1O75410 805 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 C1RP00736 705 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 ZNF18P17022 549 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 PCSK1P29120 753 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 OR1D2P34982 312 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 GNL1P36915 607 aaPredicted RBP12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 NRIP1P48552 1158 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 KRT31Q15323 416 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 FILIP1LQ4L180 1135 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 FKBP15Q5T1M5 1219 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 ELMSAN1Q6PJG2 1045 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 TTC39CQ8N584 583 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 NT5C1BQ96P26 610 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
SPTLC1-202ENST00000337841 DPP7Q9UHL4 492 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms