RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 LACTBL1A8MY62 500 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 HBP1O60381 514 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 SNAI1O95863 264 aaPredicted RBP24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 UBR7Q8N806 425 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 C1orf127Q8N9H9 656 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 SMYD3Q9H7B4 428 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 FAM114A2Q9NRY5 505 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 RSPH14Q9UHP6 348 aa24.57■■□□□ 1.52
CLPTM1-201ENST00000337392 GLTPD2A6NH11 291 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 ITGB3P05106 788 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 CHRNA3P32297 505 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 ZNF132P52740 706 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 BPIFB4P59827 614 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 GPR162Q16538 588 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 ZNF792Q3KQV3 632 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 JADE1Q6IE81 842 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 NIF3L1Q9GZT8 377 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 GOLGA8SH3BPF8 625 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 TBXAS1P24557 533 aaPredicted RBP24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 ABCD1P33897 745 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 HAUS1Q96CS2 278 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 ATP6V1G3Q96LB4 118 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 SCLT1Q96NL6 688 aa24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.56■■□□□ 1.52
CLPTM1-201ENST00000337392 PROSCO94903 275 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 PPP1R7Q15435 360 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 DENND1BQ6P3S1 775 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 ZNF677Q86XU0 584 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 STAG3L1P0CL83 205 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 ARF4P18085 180 aaPredicted RBP24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 KCNV1Q6PIU1 500 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 ZC3H15Q8WU90 426 aaKnown RBP24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 LRRC45Q96CN5 670 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 PTPN18Q99952 460 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 TMBIM4Q9HC24 238 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 PCYOX1Q9UHG3 505 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 ANK1P16157 1881 aa24.55■■□□□ 1.52
CLPTM1-201ENST00000337392 TP73O15350 636 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 NR1D1P20393 614 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 SLCO1A2P46721 670 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 KRT17Q04695 432 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 DHX34Q14147 1143 aaKnown RBP24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 KIAA0319LQ8IZA0 1049 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 NLRP7Q8WX94 980 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 CCDC114Q96M63 670 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 C16orf70Q9BSU1 422 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 AVENQ9NQS1 362 aaPredicted RBP24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 TLDC2A0PJX2 215 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 AMHR2Q16671 573 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 KIZQ2M2Z5 673 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 KRT71Q3SY84 523 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 DPP9Q86TI2 863 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 MAF1Q9H063 256 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 CNTN6Q9UQ52 1028 aa24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 MKI67P46013 3256 aaKnown RBP24.54■■□□□ 1.52
CLPTM1-201ENST00000337392 SMPD1P17405 629 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 MMP8P22894 467 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 EMC1Q8N766 993 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 FAM49AQ9H0Q0 323 aaPredicted RBP24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 RPF1Q9H9Y2 349 aaKnown RBP24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 CALCOCO1Q9P1Z2 691 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 NOVA2Q9UNW9 492 aaKnown RBP24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 HES2Q9Y543 173 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 PLXNA1Q9UIW2 1896 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 TRIP11Q15643 1979 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 ASB14A6NK59 587 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 FOXO6A8MYZ6 492 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 MYZAPP0CAP1 466 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 SEC24CP53992 1094 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 SLC29A2Q14542 456 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 SGSM1Q2NKQ1 1148 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 SMTNL2Q2TAL5 461 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 LIN9Q5TKA1 542 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 PLEKHA7Q6IQ23 1121 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 MORC4Q8TE76 937 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 PDZD7Q9H5P4 517 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 SETD4Q9NVD3 440 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 MTUS1Q9ULD2 1270 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 IVNS1ABPQ9Y6Y0 642 aa24.53■■□□□ 1.52
CLPTM1-201ENST00000337392 GLIS1Q8NBF1 620 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 KCNN1Q92952 543 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 TXLNGYQ9BZA5 131 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 KATNBL1Q9H079 304 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 FAM107BQ9H098 131 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 C10orf88Q9H8K7 445 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 H3BRB1 525 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 FSCN2O14926 492 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 ATF7P17544 494 aaPredicted RBP24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 CHKAP35790 457 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 ENPEPQ07075 957 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 KCNT1Q5JUK3 1230 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 PHF13Q86YI8 300 aaPredicted RBP24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 C2orf40Q9H1Z8 148 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 TUT1Q9H6E5 874 aaKnown RBP24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 CDHR5Q9HBB8 845 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 SAE1Q9UBE0 346 aaPredicted RBP24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 ASIC3Q9UHC3 531 aa24.52■■□□□ 1.52
CLPTM1-201ENST00000337392 LAMA3Q16787 3333 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 CAND2O75155 1236 aa24.51■■□□□ 1.51
CLPTM1-201ENST00000337392 TFDP1Q14186 410 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms