RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 FDFT1P37268 417 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 UHMK1Q8TAS1 419 aaKnown RBP12.84□□□□□ -0.35
FN1-202ENST00000336916 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 GOLPH3Q9H4A6 298 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 GID8Q9NWU2 228 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 FAM47E-STBD1D6RA91 191 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 ZC3H11AO75152 810 aaKnown RBP eCLIP12.84□□□□□ -0.352e-43■□□□□ 8.4
FN1-202ENST00000336916 HADHAP40939 763 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 CACNB3P54284 484 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 PPP2R2AP63151 447 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 HERC6Q8IVU3 1022 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 ARHGEF9O43307 516 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 GRK3P35626 688 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 TRIM65Q6PJ69 517 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 HPDLQ96IR7 371 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 THG1LQ9NWX6 298 aaKnown RBP12.84□□□□□ -0.35
FN1-202ENST00000336916 ARHGEF38Q9NXL2 777 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 PFDN1O60925 122 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 EMC2Q15006 297 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 NAPEPLDQ6IQ20 393 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 DDIASQ8IXT1 998 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 G3BP2Q9UN86 482 aaKnown RBP12.84□□□□□ -0.35
FN1-202ENST00000336916 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
FN1-202ENST00000336916 TFRCP02786 760 aaKnown RBP12.84□□□□□ -0.35
FN1-202ENST00000336916 SCARF1Q14162 830 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 C16orf89Q6UX73 402 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 PID1Q7Z2X4 250 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 RIC8BQ9NVN3 520 aa12.84□□□□□ -0.35
FN1-202ENST00000336916 SNTNA6NMZ2 147 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 CSPG5O95196 566 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 ICAM1P05362 532 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 PDHBP11177 359 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 SPRP35270 261 aaPredicted RBP12.83□□□□□ -0.35
FN1-202ENST00000336916 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.35
FN1-202ENST00000336916 SPDYAQ5MJ70 313 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 TBC1D10CQ8IV04 446 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 SOCS4Q8WXH5 440 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 ELP3Q9H9T3 547 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 KLHL11Q9NVR0 708 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 SUFUQ9UMX1 484 aa12.83□□□□□ -0.35
FN1-202ENST00000336916 A0A0G2JND7 137 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 C1orf146Q5VVC0 180 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 PPM1NQ8N819 430 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 DNERQ8NFT8 737 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 DTNBP1Q96EV8 351 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 CYTH2Q99418 400 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 SPATS2LQ9NUQ6 558 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 C16orf96A6NNT2 1141 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 HSPA9P38646 679 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 RAB27AP51159 221 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 DCAF6Q58WW2 860 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 ANKRD40Q6AI12 368 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 FAM83AQ86UY5 434 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 ADGRE3Q9BY15 652 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 GPR63Q9BZJ6 419 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 MXRA8Q9BRK3 442 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 WDR91A4D1P6 747 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 SRGAP2O75044 1071 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 ITIH2P19823 946 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 GNL1P36915 607 aaPredicted RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 LHX1P48742 406 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 PTRHD1Q6GMV3 140 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 LATS2Q9NRM7 1088 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 NAMPTP43490 491 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 CSTF3Q12996 717 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 ANGEL2Q5VTE6 544 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 CYB5R4Q7L1T6 521 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 TGS1Q96RS0 853 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 RNF103-CHMP3A0A140T963 221 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 FBXO21O94952 628 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 APOA1P02647 267 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 CDC25AP30304 524 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 TAF6P49848 677 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 CREMQ03060 361 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 HABP4Q5JVS0 413 aaKnown RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
FN1-202ENST00000336916 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
FN1-202ENST00000336916 ZNF609O15014 1411 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 PSTPIP1O43586 416 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 ASMTLO95671 621 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 RPA1P27694 616 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 SLCO1A2P46721 670 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 PDIA2Q13087 525 aaKnown RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 CDH18Q13634 790 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 TRIP13Q15645 432 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 FAM83EQ2M2I3 478 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 TRIM9Q9C026 710 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms