RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NAALADL1Q9UQQ1 740 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CNTRLQ7Z7A1 2325 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 DNM1LO00429 736 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ZNF862O60290 1169 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 TJP3O95049 919 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 VTNP04004 478 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ADSSP30520 456 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 TCF7P36402 384 aaPredicted RBP8.69□□□□□ -1.02
HPS4-201ENST00000336873 KCNJ2P63252 427 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ITIH3Q06033 890 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 FSTL1Q12841 308 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 NEDD9Q14511 834 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 CLUL1Q15846 466 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 EGFL6Q8IUX8 553 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 PDIK1LQ8N165 341 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 RNF217Q8TC41 542 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 STMN2Q93045 179 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 ANKRD36BP1Q96IX9 119 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 SNX9Q9Y5X1 595 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 GON4LQ3T8J9 2241 aa8.69□□□□□ -1.02
HPS4-201ENST00000336873 MYH11P35749 1972 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 AHDC1Q5TGY3 1603 aaPredicted RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 GRIN2DO15399 1336 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 FRMPD4Q14CM0 1322 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 A8MUI8 341 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 MCF2LO15068 1137 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CHUKO15111 745 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CREB3O43889 395 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 RBP3P10745 1247 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 SESN2P58004 480 aaPredicted RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 KDSRQ06136 332 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CYP24A1Q07973 514 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 FBXO16Q8IX29 292 aaPredicted RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 ZNF513Q8N8E2 541 aaPredicted RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 ZNF606Q8WXB4 792 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 PSPC1Q8WXF1 523 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 LRRC37BQ96QE4 947 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 SH3GL2Q99962 352 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 TEX13BQ9BXU2 312 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 SMYD3Q9H7B4 428 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 RPF1Q9H9Y2 349 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 CYP4F11Q9HBI6 524 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 IRAK4Q9NWZ3 460 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 AGAP1Q9UPQ3 857 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CCT8L1PA6NM43 557 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 WDR46O15213 610 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 ITGB3P05106 788 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CXCL8P10145 99 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CYP3A7P24462 503 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 PRKCIP41743 596 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 PDE1BQ01064 536 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CENPUQ71F23 418 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 SPATA21Q7Z572 469 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 HACE1Q8IYU2 909 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 TMEM161BQ8NDZ6 487 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 OSBPL7Q9BZF2 842 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.68□□□□□ -1.02
HPS4-201ENST00000336873 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 VWA5AO00534 786 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CAPN9O14815 690 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 TRAPPC3O43617 180 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 PRPSAP2O60256 369 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CBX6O95503 412 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 TXNP10599 105 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 LCP1P13796 627 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CUL2Q13617 745 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 PKN2Q16513 984 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 PCNX4Q63HM2 1172 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 AP1ARQ63HQ0 302 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 LVRNQ6Q4G3 990 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 MCOLN2Q8IZK6 566 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 GLIS1Q8NBF1 620 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 SPATA18Q8TC71 538 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 ACTL9Q8TC94 416 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 CFAP57Q96MR6 1250 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 DHX35Q9H5Z1 703 aaKnown RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 TJP2Q9UDY2 1190 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 HES2Q9Y543 173 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 NUB1Q9Y5A7 615 aa8.68□□□□□ -1.02
HPS4-201ENST00000336873 COL22A1Q8NFW1 1626 aaPredicted RBP8.68□□□□□ -1.02
HPS4-201ENST00000336873 ARAP2Q8WZ64 1704 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PFASO15067 1338 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 C2orf71A6NGG8 1288 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 DDX3YO15523 660 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 SLC4A1P02730 911 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PRKCBP05771 671 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PDGFRAP16234 1089 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 PECAM1P16284 738 aaPredicted RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 HSPA6P17066 643 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
HPS4-201ENST00000336873 SOX11P35716 441 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 ABCG1P45844 678 aa8.67□□□□□ -1.02
HPS4-201ENST00000336873 TMPRSS15P98073 1019 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms