RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 FZD8Q9H461 694 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 PDZD7Q9H5P4 517 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 SAE1Q9UBE0 346 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 RSPH14Q9UHP6 348 aa13.39□□□□□ -0.27
LIMK1-201ENST00000336180 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
LIMK1-201ENST00000336180 GOLGA6CA6NDK9 693 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 ERLIN2O94905 339 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 NPTXRO95502 500 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 TNNC2P02585 160 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 GOLGA6DP0CG33 693 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 LACTBP83111 547 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 ITIH3Q06033 890 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 TFDP1Q14186 410 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 UAP1Q16222 522 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 MARCH8Q5T0T0 291 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 OLFML2BQ68BL8 750 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 JAMLQ86YT9 394 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 CALR3Q96L12 384 aaKnown RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 CCDC114Q96M63 670 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 SNTG2Q9NY99 539 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 GOLGA6AQ9NYA3 693 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 IGFBP6P24592 240 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 RGS7P49802 495 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 CLDN10P78369 228 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 OGDHQ02218 1023 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 CCDC142Q17RM4 750 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 SLC10A6Q3KNW5 377 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 PLEKHH3Q7Z736 793 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 WDR49Q8IV35 697 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 ZNF513Q8N8E2 541 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 FBXO25Q8TCJ0 367 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 DNAJB3Q8WWF6 145 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 ANKRD36BP1Q96IX9 119 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 NIF3L1Q9GZT8 377 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 CARD9Q9H257 536 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 ACBD3Q9H3P7 528 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 GOLGA2P5Q9HBQ8 144 aa13.38□□□□□ -0.27
LIMK1-201ENST00000336180 UTP11Q9Y3A2 253 aaKnown RBP13.38□□□□□ -0.27
LIMK1-201ENST00000336180 TLDC2A0PJX2 215 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 FOXO6A8MYZ6 492 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 MMP3P08254 477 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 MYL3P08590 195 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 RALAP11233 206 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 HSD17B3P37058 310 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 ASPAP45381 313 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 PHKA2P46019 1235 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 TNFAIP2Q03169 654 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 MAMLD1Q13495 774 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 TAF1CQ15572 869 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-201ENST00000336180 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 MON1BQ7L1V2 547 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 FAM71BQ8TC56 605 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 XYLT2Q9H1B5 865 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 ZWILCHQ9H900 591 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 DAAM1Q9Y4D1 1078 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 SLCO1A2P46721 670 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 RWDD2BP57060 319 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 TSHZ1Q6ZSZ6 1077 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 SLC13A5Q86YT5 568 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-201ENST00000336180 WDTC1Q8N5D0 677 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 NCAPGQ9BPX3 1015 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 PTPRHQ9HD43 1115 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 FAM49BQ9NUQ9 324 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 PCSK1NQ9UHG2 260 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 TUBBP07437 444 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 RPL21P46778 160 aaKnown RBP13.37□□□□□ -0.27
LIMK1-201ENST00000336180 SYCP2LQ5T4T6 812 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 C11orf63Q6NUN7 778 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 JOSD2Q8TAC2 188 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 TMEM174Q8WUU8 243 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 CD101Q93033 1021 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
LIMK1-201ENST00000336180 DCDC2CA8MYV0 355 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 PMM2O15305 246 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 SGO2Q562F6 1265 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 FAM107BQ9H098 131 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 ZEB2O60315 1214 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 MAP3K6O95382 1288 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 SHBGP04278 402 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 CYP1A1P04798 512 aaPredicted RBP13.36□□□□□ -0.27
LIMK1-201ENST00000336180 CTNNA1P35221 906 aaKnown RBP13.36□□□□□ -0.27
LIMK1-201ENST00000336180 RABGGTBP53611 331 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 PPP1R7Q15435 360 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 GLE1Q53GS7 698 aaKnown RBP13.36□□□□□ -0.27
LIMK1-201ENST00000336180 ZNF667Q5HYK9 610 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 CATSPER4Q7RTX7 472 aa13.36□□□□□ -0.27
LIMK1-201ENST00000336180 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms