RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 RPS12P25398 132 aaKnown RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 PIK3CAP42336 1068 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 CUL3Q13618 768 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 FAM81AQ8TBF8 368 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 PAIP2Q9BPZ3 127 aaKnown RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 HERPUD2Q9BSE4 406 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 KLHL11Q9NVR0 708 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 hCG_2014768A0A024R1R8 64 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 HLA-DRAP01903 254 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 SP100P23497 879 aaPredicted RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 R3HDM1Q15032 1099 aaKnown RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 ZNF394Q53GI3 561 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 SEL1L2Q5TEA6 688 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 DUPD1Q68J44 220 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 LMNTD2Q8IXW0 634 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 SPIRE2Q8WWL2 714 aa14.72□□□□□ -0.05
SF1-202ENST00000334944 UTP4Q969X6 686 aaKnown RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 NTPCRQ9BSD7 190 aaKnown RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 AGO2Q9UKV8 859 aaKnown RBP14.72□□□□□ -0.05
SF1-202ENST00000334944 LIN7AO14910 233 aaPredicted RBP14.71□□□□□ -0.05
SF1-202ENST00000334944 RGS16O15492 202 aaPredicted RBP14.71□□□□□ -0.05
SF1-202ENST00000334944 SUPT20HL2P0C7V6 817 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 GM2AP17900 193 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 GLRA2P23416 452 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 SUPT20HL1Q3ZLR7 823 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 FOXB2Q5VYV0 432 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 C11orf63Q6NUN7 778 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 TMEM270Q6UE05 265 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 MCPH1Q8NEM0 835 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 OR5B17Q8NGF7 314 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 FBXL18Q96ME1 805 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 C11orf70Q9BRQ4 267 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 CNOT10Q9H9A5 744 aaKnown RBP14.71□□□□□ -0.05
SF1-202ENST00000334944 ZNF302Q9NR11 478 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 PDLIM7Q9NR12 457 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 ARHGAP28Q9P2N2 729 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 USTQ9Y2C2 406 aa14.71□□□□□ -0.05
SF1-202ENST00000334944 SPATA31C2B4DYI2 1134 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 K7ERI5 159 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 KIAA0391O15091 583 aaKnown RBP14.71□□□□□ -0.06
SF1-202ENST00000334944 ALDH3A1P30838 453 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 STRN3Q13033 797 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 BRDTQ58F21 947 aaPredicted RBP14.71□□□□□ -0.06
SF1-202ENST00000334944 PRUNE1Q86TP1 453 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 NCAPG2Q86XI2 1143 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 TTC8Q8TAM2 541 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 DEPTORQ8TB45 409 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 SLC16A10Q8TF71 515 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 TIPINQ9BVW5 301 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 SEMA4AQ9H3S1 761 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 APOBEC3GQ9HC16 384 aaKnown RBP14.71□□□□□ -0.06
SF1-202ENST00000334944 TTC7AQ9ULT0 858 aaPredicted RBP14.71□□□□□ -0.06
SF1-202ENST00000334944 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.06
SF1-202ENST00000334944 MYH9P35579 1960 aaKnown RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 PGK2P07205 417 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 GJB1P08034 283 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 GZMAP12544 262 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 MAPK4P31152 587 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 TNFSF9P41273 254 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 ZDHHC24Q6UX98 284 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 CCNJLQ8IV13 435 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 SAMD3Q8N6K7 520 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 TCHPQ9BT92 498 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 RAB17Q9H0T7 212 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 FAM114A2Q9NRY5 505 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 ZDHHC18Q9NUE0 388 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 RBAKQ9NYW8 714 aaPredicted RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 SYNGAP1Q96PV0 1343 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 LOXHD1Q8IVV2 1947 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 FZD9O00144 591 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 PHF2O75151 1096 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 SRGAP2CP0DJJ0 459 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 PTGIRP43119 386 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 OSTNP61366 133 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 TMEM62Q0P6H9 643 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 BNIP1Q12981 228 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 MTMR3Q13615 1198 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 SLC29A2Q14542 456 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 LY6KQ17RY6 165 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 XKR3Q5GH77 459 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 ACAD10Q6JQN1 1059 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 MOB2Q70IA6 237 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 SLC13A5Q86YT5 568 aaPredicted RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 FBF1Q8TES7 1133 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 CD101Q93033 1021 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 RNF25Q96BH1 459 aaPredicted RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 PWWP2AQ96N64 755 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 NAP1L3Q99457 506 aaPredicted RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 MSTO1Q9BUK6 570 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 ARHGEF3Q9NR81 526 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 USP15Q9Y4E8 981 aaPredicted RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 POLR2AP24928 1970 aaKnown RBP14.7□□□□□ -0.06
SF1-202ENST00000334944 WDR81Q562E7 1941 aa14.7□□□□□ -0.06
SF1-202ENST00000334944 VNN1O95497 513 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 CYP1A2P05177 515 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 CD58P19256 250 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 STXBP2Q15833 593 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 CLEC16AQ2KHT3 1053 aa14.69□□□□□ -0.06
SF1-202ENST00000334944 TMEM63BQ5T3F8 832 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms