RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PIGRP01833 764 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 PSMC3P17980 439 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 PAX7P23759 505 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CDC25CP30307 473 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SLC16A2P36021 539 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SLC4A3P48751 1232 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ADCY7P51828 1080 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 FGD1P98174 961 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ST3GAL1Q11201 340 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 FLIIQ13045 1269 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 PRKG1Q13976 671 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 DCAF4L1Q3SXM0 396 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 GNASQ5JWF2 1037 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SH3PXD2AQ5TCZ1 1133 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CYP2U1Q7Z449 544 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 HAUS6Q7Z4H7 955 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 RTN4RL1Q86UN2 441 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 GALNT13Q8IUC8 556 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 IFNL3Q8IZI9 196 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 LGI4Q8N135 537 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ARMC10Q8N2F6 343 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CPXM2Q8N436 756 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CPA6Q8N4T0 437 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CRACR2BQ8N4Y2 399 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 BEND7Q8N7W2 519 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 KCT2Q8NC54 265 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ADCY4Q8NFM4 1077 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 DNAJB8Q8NHS0 232 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CCER1Q8TC90 406 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 YME1L1Q96TA2 773 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ORAI3Q9BRQ5 295 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MKNK1Q9BUB5 465 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 DUSP23Q9BVJ7 150 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 REPIN1Q9BWE0 567 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MFSD1Q9H3U5 465 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ECT2Q9H8V3 914 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CBX8Q9HC52 389 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 PCDH18Q9HCL0 1135 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 PNPLA8Q9NP80 782 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 WDR70Q9NW82 654 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SPATA6Q9NWH7 488 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MARCH5Q9NX47 278 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 KCNK4Q9NYG8 393 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 AFF4Q9UHB7 1163 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 DSEQ9UL01 958 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CEP350Q5VT06 3117 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 NPHP1O15259 732 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MOSPD3O75425 235 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 GNAI3P08754 354 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SRGAP2CP0DJJ0 459 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 PTPN2P17706 415 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CLK2P49760 499 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 DNM2P50570 870 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CCT8P50990 548 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MMP16P51512 607 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 STAT2P52630 851 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CSTF1Q05048 431 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 GFPT1Q06210 699 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 DLX2Q07687 328 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 TNK2Q07912 1038 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SEMA5AQ13591 1074 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 TERF2Q15554 542 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ZRSR2Q15696 482 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 GAB4Q2WGN9 574 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 GNPTABQ3T906 1256 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MPP7Q5T2T1 576 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SHEQ5VZ18 495 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 UGT2A3Q6UWM9 527 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 LRRC55Q6ZSA7 311 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SMIM5Q71RC9 77 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 LYSMD3Q7Z3D4 306 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 TBC1D1Q86TI0 1168 aaPredicted RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ITIH5Q86UX2 942 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 MEX3DQ86XN8 651 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 TEX11Q8IYF3 940 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 HACE1Q8IYU2 909 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SIX5Q8N196 739 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 URGCPQ8TCY9 931 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SCYL1Q96KG9 808 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CDK5RAP1Q96SZ6 601 aaKnown RBP1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SCNM1Q9BWG6 230 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 C22orf23Q9BZE7 217 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SLC6A17Q9H1V8 727 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 SYTL2Q9HCH5 934 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 CYLDQ9NQC7 956 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 INCENPQ9NQS7 918 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ITM2CQ9NQX7 267 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 AGPAT5Q9NUQ2 364 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 HMG20BQ9P0W2 317 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 APPL1Q9UKG1 709 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 ARHGAP26Q9UNA1 814 aa1.79□□□□□ -2.12
LINC00643-201ENST00000334389 TTC41PQ6P2S7 1318 aa1.78□□□□□ -2.12
LINC00643-201ENST00000334389 TCHHQ07283 1943 aa1.78□□□□□ -2.12
LINC00643-201ENST00000334389 EIF4E1BA6NMX2 242 aaKnown RBP1.78□□□□□ -2.12
LINC00643-201ENST00000334389 MPHOSPH10O00566 681 aaKnown RBP1.78□□□□□ -2.12
LINC00643-201ENST00000334389 LINC01565O15544 149 aa1.78□□□□□ -2.12
LINC00643-201ENST00000334389 GRID2O43424 1007 aa1.78□□□□□ -2.12
LINC00643-201ENST00000334389 LATO43561 262 aa1.78□□□□□ -2.12
LINC00643-201ENST00000334389 AP1G1O43747 822 aa1.78□□□□□ -2.12
LINC00643-201ENST00000334389 VAMP4O75379 141 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms