RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 MIGA2Q7L4E1 593 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TUBGCP5Q96RT8 1024 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ARPP21Q9UBL0 812 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 hCG_1984214I3L0E3 225 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ENO3P13929 434 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TGFBR2P37173 567 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 SERPINB9P50453 376 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 STX5Q13190 355 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF618Q5T7W0 954 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 TPTE2Q6XPS3 522 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 PDPRQ8NCN5 879 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 NOL6Q9H6R4 1146 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 DSEQ9UL01 958 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 KIAA1024Q9UPX6 916 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 CDYLQ9Y232 598 aa10.79□□□□□ -0.68
SPTBN1-201ENST00000333896 A0A1W2PQJ5 194 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ASS1P00966 412 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF846Q147U1 533 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 KIAA1841Q6NSI8 718 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 V9GYQ6 96 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ASXL2Q76L83 1435 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 NCF4Q15080 339 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ZBTB8BQ8NAP8 495 aaPredicted RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 CLIC6Q96NY7 704 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TEKT3Q9BXF9 490 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 RAD18Q9NS91 495 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 C20orf96Q9NUD7 363 aaPredicted RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TUBGCP4Q9UGJ1 667 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 NEK10Q6ZWH5 1172 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 POP5Q969H6 163 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TRIM51Q9BSJ1 452 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 IMPAD1Q9NX62 359 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 CCDC182A6NF36 153 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 KATNA1O75449 491 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 SERPIND1P05546 499 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 SLC39A6Q13433 755 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TMPRSS6Q8IU80 811 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 GIPC3Q8TF64 312 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 JMJD4Q9H9V9 463 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TUFT1Q9NNX1 390 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 DDX56Q9NY93 547 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TTC7AQ9ULT0 858 aaPredicted RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 PRDM15P57071 1507 aaPredicted RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ATP10DQ9P241 1426 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 NEMP1O14524 444 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TAP1Q03518 808 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ZSWIM7Q19AV6 140 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ATP13A5Q4VNC0 1218 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 ALFQ53S48 1182 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 MMP1P03956 469 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 MAPKAPK2P49137 400 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 MCL1Q07820 350 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 MTA1Q13330 715 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 Q3C1V9 767 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 RFFLQ8WZ73 363 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 MAGEB5Q9BZ81 275 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 GIN1Q9NXP7 522 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 CD58P19256 250 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 CCNCP24863 283 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 SEC24CP53992 1094 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 CYP27A1Q02318 531 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TRAP1Q12931 704 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 EFHC1Q5JVL4 640 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 BBS7Q8IWZ6 715 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 DQX1Q8TE96 717 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 TMEM79Q9BSE2 394 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 BTBD10Q9BSF8 475 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 NXF1Q9UBU9 619 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 PPP2R3BQ9Y5P8 575 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
SPTBN1-201ENST00000333896 PEX1O43933 1283 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 GPC5P78333 572 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 ALDH6A1Q02252 535 aaKnown RBP10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 NSUN7Q8NE18 718 aaKnown RBP10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 OTUD7AQ8TE49 926 aaPredicted RBP10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 FAR2Q96K12 515 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 UBA6A0AVT1 1052 aaPredicted RBP10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 SLC1A1P43005 524 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 USP39Q53GS9 565 aaKnown RBP10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 UNC13DQ70J99 1090 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 TGFBRAP1Q8WUH2 860 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 PTTG2Q9NZH5 202 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 SNX24Q9Y343 169 aa10.77□□□□□ -0.68
SPTBN1-201ENST00000333896 MMRN1Q13201 1228 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 ITSN1Q15811 1721 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 SLC10A5Q5PT55 438 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 SDE2Q6IQ49 451 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 MYLK2Q9H1R3 596 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 STK25O00506 426 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 UFL1O94874 794 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 PPP3CCP48454 512 aa10.77□□□□□ -0.69
SPTBN1-201ENST00000333896 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms