RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PLPP4Q5VZY2 271 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 PRSS55Q6UWB4 352 aaPredicted RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 TMC7Q7Z402 723 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 MRPL43Q8N983 215 aaKnown RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 LNX1Q8TBB1 728 aaPredicted RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 ELMO3Q96BJ8 720 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 CDX2Q99626 313 aaPredicted RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 APOBEC3GQ9HC16 384 aaKnown RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 SNX9Q9Y5X1 595 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 MTCH2Q9Y6C9 303 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 MYO9BQ13459 2157 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 ARHGEF37A1IGU5 675 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 HIDE1A8MVS5 230 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 TBC1D4O60343 1298 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
LRRC28-202ENST00000331450 SOWAHAQ2M3V2 549 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 WDR72Q3MJ13 1102 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 VARS2Q5ST30 1063 aaKnown RBP17.22■□□□□ 0.35
LRRC28-202ENST00000331450 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 PDXDC1Q6P996 788 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 ANKS3Q6ZW76 656 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 CEP57Q86XR8 500 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 TOP6BLQ8N6T0 577 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 APPL2Q8NEU8 664 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 SPATA18Q8TC71 538 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 KBTBD7Q8WVZ9 684 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 MYLIPQ8WY64 445 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 RIN2Q8WYP3 895 aaPredicted RBP17.22■□□□□ 0.35
LRRC28-202ENST00000331450 BCO2Q9BYV7 579 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 IMPG2Q9BZV3 1241 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 MRPL17Q9NRX2 175 aaKnown RBP17.22■□□□□ 0.35
LRRC28-202ENST00000331450 MTRRQ9UBK8 725 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 DSEQ9UL01 958 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 POLIQ9UNA4 740 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 SSX2IPQ9Y2D8 614 aa17.22■□□□□ 0.35
LRRC28-202ENST00000331450 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
LRRC28-202ENST00000331450 PTPRDP23468 1912 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.21■□□□□ 0.35
LRRC28-202ENST00000331450 C2CD2LO14523 706 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 HUS1O60921 280 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 OAZ2O95190 189 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 CSPG5O95196 566 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 CXCL14O95715 111 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 ASPAP45381 313 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 TNNC1P63316 161 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 YWHAHQ04917 246 aaPredicted RBP17.21■□□□□ 0.35
LRRC28-202ENST00000331450 PSMD5Q16401 504 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 WSCD1Q658N2 575 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 KIAA1841Q6NSI8 718 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 ADGRD2Q7Z7M1 963 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 FAXDC2Q96IV6 333 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 GAS2L1Q99501 681 aaPredicted RBP17.21■□□□□ 0.35
LRRC28-202ENST00000331450 NIF3L1Q9GZT8 377 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 VPS16Q9H269 839 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
LRRC28-202ENST00000331450 GCNT4Q9P109 453 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 BACE2Q9Y5Z0 518 aa17.21■□□□□ 0.35
LRRC28-202ENST00000331450 GABRDO14764 452 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 TACC1O75410 805 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 CNPP09543 421 aaKnown RBP17.2■□□□□ 0.34
LRRC28-202ENST00000331450 FAM163BP0C2L3 166 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 CREMQ03060 361 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 CETN1Q12798 172 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
LRRC28-202ENST00000331450 OVOS1Q6IE37 1185 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 RSPO2Q6UXX9 243 aaPredicted RBP17.2■□□□□ 0.34
LRRC28-202ENST00000331450 ADGRF2Q8IZF7 708 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 TMEM86AQ8N2M4 240 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 EHBP1Q8NDI1 1231 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 ANKRD20A12PQ8NF67 263 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 RTP3Q9BQQ7 232 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 SDCBP2Q9H190 292 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 NSUN3Q9H649 340 aaKnown RBP17.2■□□□□ 0.34
LRRC28-202ENST00000331450 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 NXF1Q9UBU9 619 aaKnown RBP17.2■□□□□ 0.34
LRRC28-202ENST00000331450 SZT2Q5T011 3432 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 REV3LO60673 3130 aa17.2■□□□□ 0.34
LRRC28-202ENST00000331450 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 H7C4K7 107 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 CDK11BP21127 795 aaKnown RBP17.19■□□□□ 0.34
LRRC28-202ENST00000331450 WARSP23381 471 aaKnown RBP17.19■□□□□ 0.34
LRRC28-202ENST00000331450 SLC8B1Q6J4K2 584 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 TRIM65Q6PJ69 517 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 OSTM1Q86WC4 334 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 MICAL1Q8TDZ2 1067 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 TATDN2Q93075 761 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 KLHL5Q96PQ7 755 aa17.19■□□□□ 0.34
LRRC28-202ENST00000331450 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms