RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ATP6V1C1P21283 382 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 ARHGAP15Q53QZ3 475 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 ANKS6Q68DC2 871 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLN8-201ENST00000331222 EXOC4Q96A65 974 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 TRIM51Q9BSJ1 452 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 THTPAQ9BU02 230 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 APPL1Q9UKG1 709 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 ERVK-10P10266 1014 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 TOB2Q14106 344 aaPredicted RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 KCNB1Q14721 858 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 KRT77Q7Z794 578 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 IPCEF1Q8WWN9 437 aaPredicted RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 ELMO3Q96BJ8 720 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 KATNAL1Q9BW62 490 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PSMD14O00487 310 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 FEN1P39748 380 aaKnown RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 RAP1GAPP47736 663 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 TRIP4Q15650 581 aaPredicted RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 MIB1Q86YT6 1006 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 MTIF3Q9H2K0 278 aaKnown RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 NOP53Q9NZM5 478 aaKnown RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ITGB3P05106 788 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 C2CD6Q53TS8 623 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 TDRD10Q5VZ19 366 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 FOXR1Q6PIV2 292 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 GLB1LQ6UWU2 654 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ANO5Q75V66 913 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 UXS1Q8NBZ7 420 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 STRNO43815 780 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ABCB1P08183 1280 aaPredicted RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 RANBP1P43487 201 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 RALGDSQ12967 914 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 MTF1Q14872 753 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 RARS2Q5T160 578 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 GJB7Q6PEY0 223 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 TMEM245Q9H330 911 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CRLS1Q9UJA2 301 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 TDRKHQ9Y2W6 561 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 NPHP4O75161 1426 aaPredicted RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 TRIM16O95361 564 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 MROH9Q5TGP6 573 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 FBXW10Q5XX13 1052 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ARL6IP4Q66PJ3 421 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 ZKSCAN4Q969J2 545 aaPredicted RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 CFAP74Q9C0B2 1584 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 XPO1O14980 1071 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 HPGDP15428 266 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CPA2P48052 419 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ALDH9A1P49189 494 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CYFIP2Q96F07 1278 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ACTR5Q9H9F9 607 aaPredicted RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 SPON1Q9HCB6 807 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 GIMAP4Q9NUV9 329 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 FBXL21Q9UKT6 434 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 ABCA8O94911 1581 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 KDM5CP41229 1560 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 GMNCA6NCL1 334 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CSDE1O75534 798 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 PLA2G4AP47712 749 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 COG2Q14746 738 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 PPP1R13LQ8WUF5 828 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 MRPL1Q9BYD6 325 aaKnown RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 KRT84Q9NSB2 600 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CEP170Q5SW79 1584 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 RTN2O75298 545 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 SH3BGRLO75368 114 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 GH1P01241 217 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 GPC1P35052 558 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 MAP3K7CLP57077 242 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 HIC1Q14526 733 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CENPPQ6IPU0 288 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 C3orf62Q6ZUJ4 267 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CIPCQ9C0C6 399 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 FBXO2Q9UK22 296 aaPredicted RBP11.04□□□□□ -0.64
CLN8-201ENST00000331222 RCOR1Q9UKL0 485 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 CDYLQ9Y232 598 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 KIF24Q5T7B8 1368 aa11.04□□□□□ -0.64
CLN8-201ENST00000331222 RNF103O00237 685 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 RGS5O15539 181 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 SMNDC1O75940 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLN8-201ENST00000331222 NFICP08651 508 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 MBL2P11226 248 aaPredicted RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 ALOX15P16050 662 aaPredicted RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 GTF2H1P32780 548 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 DGKDQ16760 1214 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 ATF7IP2Q5U623 682 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 LONP2Q86WA8 852 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
CLN8-201ENST00000331222 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
CLN8-201ENST00000331222 RSPH9Q9H1X1 276 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms