RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 GOLGA8IPA6NC78 632 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 GOLGA8JA6NMD2 632 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 B2RBV5 119 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 H3BRJ5 948 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 RPS6KA4O75676 772 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 ARFIP2P53365 341 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 NFIXQ14938 502 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 ATP13A4Q4VNC1 1196 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 ODR4Q5SWX8 454 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 RGS9BPQ6ZS82 235 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 FNBP1Q96RU3 617 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 TMEM117Q9H0C3 514 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 CLIC5Q9NZA1 410 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 PI4K2BG5E9Z4 385 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 SNHG28P0DPA3 235 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 TROVE2P10155 538 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 KRT10P13645 584 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 ANPEPP15144 967 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 PSMC4P43686 418 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 RASA3Q14644 834 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 DNAJC14Q6Y2X3 702 aaPredicted RBP14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 SH2D3AQ9BRG2 576 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 CBWD1Q9BRT8 395 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 NMUR2Q9GZQ4 415 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 FAM192AQ9GZU8 254 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 MMADHCQ9H3L0 296 aaPredicted RBP14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 OLFML3Q9NRN5 406 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 DMAC2Q9NW81 257 aa14.2□□□□□ -0.14
CCDC88C-201ENST00000331194 FAM237BA0A1B0GVD1 139 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 OPHN1O60890 802 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ENO1P06733 434 aaKnown RBP14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 FDX1P10109 184 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 SEPT7Q16181 437 aaKnown RBP14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 WDR66Q8TBY9 1149 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 HAUS1Q96CS2 278 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 CFAP57Q96MR6 1250 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 C10orf88Q9H8K7 445 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ARHGEF4Q9NR80 690 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ATXN10Q9UBB4 475 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 USTQ9Y2C2 406 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 MTA2O94776 668 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ADSSP30520 456 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 SSTR1P30872 391 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 KDSRQ06136 332 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 TMEM62Q0P6H9 643 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 C1orf220Q5T0J3 134 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 C1orf186Q6ZWK4 172 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 RAPH1Q70E73 1250 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 KRT27Q7Z3Y8 459 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 SATL1Q86VE3 508 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 CPA5Q8WXQ8 436 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 SEMA4DQ92854 862 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 PANX3Q96QZ0 392 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ECSITQ9BQ95 431 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 WRAP73Q9P2S5 460 aaPredicted RBP14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ZNF212Q9UDV6 495 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 NARFQ9UHQ1 456 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 RPL26L1Q9UNX3 145 aaKnown RBP14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 E5RJQ4 531 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ZWINTO95229 277 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 ARL4CP56559 192 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 RHBDL3P58872 404 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 LSAMPQ13449 338 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 RIPOR1Q6ZS17 1223 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 TREML1Q86YW5 311 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 CFAP61Q8NHU2 1237 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 THTPAQ9BU02 230 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 MANSC1Q9H8J5 431 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 GTF3C4Q9UKN8 822 aa14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 SMG5Q9UPR3 1016 aaKnown RBP14.19□□□□□ -0.14
CCDC88C-201ENST00000331194 UMODL1Q5DID0 1318 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 NAV1Q8NEY1 1877 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 ATP6V1G1O75348 118 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 HARSP12081 509 aaKnown RBP14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 CYP11B1P15538 503 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 TAS2R40P59535 323 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 BPIFB4P59827 614 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 CAV1Q03135 178 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 CDC16Q13042 620 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 ZRSR2Q15696 482 aaKnown RBP14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 ZCCHC9Q8N567 271 aaKnown RBP14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 GRK7Q8WTQ7 553 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 DDX27Q96GQ7 796 aaKnown RBP14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 TRIM55Q9BYV6 548 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 VCX3BQ9H321 246 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 ZNF395Q9H8N7 513 aaPredicted RBP14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 RMI1Q9H9A7 625 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 VCX3AQ9NNX9 186 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 VAV3Q9UKW4 847 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 F5H6K3 240 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 FCHO1O14526 889 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 RARBP10826 455 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 MYL2P10916 166 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 KLRC2P26717 231 aa14.18□□□□□ -0.14
CCDC88C-201ENST00000331194 UBXN2AP68543 259 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms