RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TBX10O75333 385 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 ZWINTO95229 277 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 TBC1D10BQ4KMP7 808 aaPredicted RBP19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 RDH13Q8NBN7 331 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 BBOF1Q8ND07 529 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 ZNF398Q8TD17 642 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 PTPRN2Q92932 1015 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 KAT5Q92993 513 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 FIZ1Q96SL8 496 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 P2RX7Q99572 595 aaKnown RBP19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 EIF2AK1Q9BQI3 630 aaKnown RBP19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 POLR3CQ9BUI4 534 aaPredicted RBP19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 PARVGQ9HBI0 331 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 ZBTB21Q9ULJ3 1066 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 EMSYQ7Z589 1322 aa19.16■□□□□ 0.66
CLSTN3-202ENST00000331148 NDUFB10O96000 172 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 CA4P22748 312 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 PLEKHG4Q58EX7 1191 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 HHATQ5VTY9 493 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 TDRPQ86YL5 185 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 PPFIBP2Q8ND30 876 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 AZIN2Q96A70 460 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 PTCD3Q96EY7 689 aaKnown RBP19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 CFAP57Q96MR6 1250 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 RBM15Q96T37 977 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 SCAF8Q9UPN6 1271 aaKnown RBP19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 PCDHA1Q9Y5I3 950 aa19.15■□□□□ 0.66
CLSTN3-202ENST00000331148 GSC2O15499 205 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 KRT15P19012 456 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 CAP2P40123 477 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 DLG4P78352 724 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 FMO1Q01740 532 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 AP3B2Q13367 1082 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 QRICH1Q2TAL8 776 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 ZNF720Q7Z2F6 126 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 FAM81AQ8TBF8 368 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 ZNF75CPQ92670 426 aaPredicted RBP19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 DTNBP1Q96EV8 351 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 SYNCQ9H7C4 482 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 DMAP1Q9NPF5 467 aaPredicted RBP19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 ACP6Q9NPH0 428 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 ARL8BQ9NVJ2 186 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 SENP1Q9P0U3 644 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 KANSL3Q9P2N6 904 aa19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 STX18Q9P2W9 335 aaKnown RBP19.14■□□□□ 0.66
CLSTN3-202ENST00000331148 FAM86B1E9PN63 330 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 EML1O00423 815 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 MAP3K7O43318 606 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 FAM86B2P0C5J1 330 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 C1orf186Q6ZWK4 172 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 ZNF365Q70YC5 407 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 KBTBD2Q8IY47 623 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 ZCCHC9Q8N567 271 aaKnown RBP19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 DTX3LQ8TDB6 740 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 SLC5A5Q92911 643 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 FAM20AQ96MK3 541 aa19.14■□□□□ 0.65
CLSTN3-202ENST00000331148 POC1B-GALNT4F8VUJ3 575 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 MEIS2O14770 477 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 HAUS5O94927 633 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 TROVE2P10155 538 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 GSTT1P30711 240 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 CENPCQ03188 943 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 GSTA3Q16772 222 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 EPC2Q52LR7 807 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 CCDC89Q8N998 374 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 STMN2Q93045 179 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 TEPSINQ96N21 525 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 ZNF184Q99676 751 aaPredicted RBP19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 MSH4O15457 936 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 TYROBPO43914 113 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 BMP3P12645 472 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 RANBP1P43487 201 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 LRRC23Q53EV4 343 aaPredicted RBP19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 ARMC3Q5W041 872 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 STXBP4Q6ZWJ1 553 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 SLC47A2Q86VL8 602 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 FAM178BQ8IXR5 827 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 FAM71AQ8IYT1 594 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 RFWD2Q8NHY2 731 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 SAYSD1Q9NPB0 183 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 KRT82Q9NSB4 513 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 ANKFY1Q9P2R3 1169 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 HACL1Q9UJ83 578 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 DCTN4Q9UJW0 460 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 TMX2Q9Y320 296 aa19.13■□□□□ 0.65
CLSTN3-202ENST00000331148 GYG2O15488 501 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 CYP26A1O43174 497 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 ECE1P42892 770 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 PSMC4P43686 418 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 PPP3CAQ08209 521 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 CETN1Q12798 172 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 LVRNQ6Q4G3 990 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 SLC9A9Q8IVB4 645 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 WDR60Q8WVS4 1066 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 MCUR1Q96AQ8 359 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 SEL1LQ9UBV2 794 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 ZNF212Q9UDV6 495 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 ASTN2O75129 1339 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms