RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PASD1Q8IV76 773 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 RBM12BQ8IXT5 1001 aaKnown RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 OLIG1Q8TAK6 271 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 NR1H4Q96RI1 486 aaPredicted RBP21.71■■□□□ 1.07
CMTM4-201ENST00000330687 MIS12Q9H081 205 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 IKBKGQ9Y6K9 419 aa21.71■■□□□ 1.07
CMTM4-201ENST00000330687 ASLP04424 464 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 TFDP1Q14186 410 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 PRPF39Q86UA1 669 aaKnown RBP21.7■■□□□ 1.06
CMTM4-201ENST00000330687 ARID3BQ8IVW6 561 aaPredicted RBP21.7■■□□□ 1.06
CMTM4-201ENST00000330687 PPP2R3CQ969Q6 453 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 RMI1Q9H9A7 625 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 PCDHA1Q9Y5I3 950 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 MROH7Q68CQ1 1323 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 FAM163BP0C2L3 166 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 HOXA13P31271 388 aaPredicted RBP21.7■■□□□ 1.06
CMTM4-201ENST00000330687 AQP4P55087 323 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 BBS9Q3SYG4 887 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 PANX3Q96QZ0 392 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 DKC1O60832 514 aaKnown RBP eCLIP21.7■■□□□ 1.06
CMTM4-201ENST00000330687 PPP1R11O60927 126 aaPredicted RBP21.7■■□□□ 1.06
CMTM4-201ENST00000330687 GRIA2P42262 883 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 GSTA3Q16772 222 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 PAOXQ6QHF9 649 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 TRIM67Q6ZTA4 783 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 DENND1AQ8TEH3 1009 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 JMJD4Q9H9V9 463 aa21.7■■□□□ 1.06
CMTM4-201ENST00000330687 LPXNO60711 386 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 PTK6Q13882 451 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 OR6Y1Q8NGX8 325 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 OXNAD1Q96HP4 312 aaPredicted RBP21.69■■□□□ 1.06
CMTM4-201ENST00000330687 TMOD2Q9NZR1 351 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 ATP2A1O14983 1001 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 SLC25A3Q00325 362 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 CYP1B1Q16678 543 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 KCTD21Q4G0X4 260 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 ATP13A4Q4VNC1 1196 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 SFT2D3Q587I9 215 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 MECRQ9BV79 373 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 ANO3Q9BYT9 981 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 CAMTA1Q9Y6Y1 1673 aa21.69■■□□□ 1.06
CMTM4-201ENST00000330687 SPECC1L-ADORA2AF8WAN1 911 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 SGK1O00141 431 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 TRAFD1O14545 582 aaPredicted RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 ZNF862O60290 1169 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 BTDP43251 543 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 CDK16Q00536 496 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 CTAGE3PQ8IX95 158 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 ULK2Q8IYT8 1036 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 IWS1Q96ST2 819 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 DDX39AO00148 427 aaKnown RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 SLC16A3O15427 465 aaKnown RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 MT-ND3P03897 115 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 PEX2P28328 305 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 MAGEA8P43361 318 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 GAD2Q05329 585 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 MPP3Q13368 585 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 ERLEC1Q96DZ1 483 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 SIKE1Q9BRV8 207 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 YIPF2Q9BWQ6 316 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 PSMC3IPQ9P2W1 217 aaPredicted RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 FAF1Q9UNN5 650 aaPredicted RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 FRMPD4Q14CM0 1322 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 SORBS2O94875 1100 aaKnown RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 BFSP1Q12934 665 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 C1QTNF12Q5T7M4 302 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 ZSWIM2Q8NEG5 633 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 PYROXD1Q8WU10 500 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 HSPBAP1Q96EW2 488 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 PTCD3Q96EY7 689 aaKnown RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 ACAP3Q96P50 834 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 KLHL4Q9C0H6 718 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 RANBP17Q9H2T7 1088 aaKnown RBP21.68■■□□□ 1.06
CMTM4-201ENST00000330687 SLC7A8Q9UHI5 535 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 ZBTB21Q9ULJ3 1066 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 PCDHGA4Q9Y5G9 962 aa21.68■■□□□ 1.06
CMTM4-201ENST00000330687 PALM2Q8IXS6 379 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 RAB3IL1Q8TBN0 382 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 SLC13A1Q9BZW2 595 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 BOLA2-SMG1P6H3BVE0 249 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 FSCN2O14926 492 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 TMPRSS15P98073 1019 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 CAV1Q03135 178 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 TREML1Q86YW5 311 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 AGPAT3Q9NRZ7 376 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 CICQ96RK0 1608 aaPredicted RBP21.67■■□□□ 1.06
CMTM4-201ENST00000330687 GCAP28676 217 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 PPP3CAQ08209 521 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 CBX3Q13185 183 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 TBC1D9BQ66K14 1250 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 C3orf62Q6ZUJ4 267 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 EPS8L1Q8TE68 723 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 TTC25Q96NG3 672 aa21.67■■□□□ 1.06
CMTM4-201ENST00000330687 LOC100653049A0A140TA62 436 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 ERVV-1B6SEH8 477 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 SORBS3O60504 671 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 KRT34O76011 436 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 MUTP22033 750 aa21.66■■□□□ 1.06
CMTM4-201ENST00000330687 TCHHL1Q5QJ38 904 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms