RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PRUNE1Q86TP1 453 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 MAGEB18Q96M61 343 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 RBM15Q96T37 977 aaKnown RBP eCLIP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 ECT2Q9H8V3 914 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 JPH1Q9HDC5 661 aaPredicted RBP16.28■□□□□ 0.2
BRCC3-201ENST00000330045 MCM8Q9UJA3 840 aa16.28■□□□□ 0.2
BRCC3-201ENST00000330045 RGS20O76081 388 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 MAGEA4P43358 317 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 ADCY1Q08828 1119 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 RIPK1Q13546 671 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 MTERF2Q49AM1 385 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 SEPT14Q6ZU15 432 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 CEP128Q6ZU80 1094 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 ZCCHC9Q8N567 271 aaKnown RBP16.27■□□□□ 0.2
BRCC3-201ENST00000330045 FEZF2Q8TBJ5 459 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 KLRG1Q96E93 195 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 FOXP3Q9BZS1 431 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 SLC9A2Q9UBY0 812 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 PRKAG3Q9UGI9 489 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.27■□□□□ 0.2
BRCC3-201ENST00000330045 STYXL1Q9Y6J8 313 aa16.27■□□□□ 0.2
BRCC3-201ENST00000330045 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.2
BRCC3-201ENST00000330045 NQO1P15559 274 aaKnown RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 BNIP1Q12981 228 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 CYP4F22Q6NT55 531 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 CRELD2Q6UXH1 353 aaPredicted RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 PPP1R21Q6ZMI0 780 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 ANKRD35Q8N283 1001 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 GIMAP7Q8NHV1 300 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 PARVAQ9NVD7 372 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 EURLQ9NYK6 297 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 RBAKQ9NYW8 714 aaPredicted RBP16.27■□□□□ 0.19
BRCC3-201ENST00000330045 KCNG1Q9UIX4 513 aa16.27■□□□□ 0.19
BRCC3-201ENST00000330045 RASA4BC9J798 803 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 RASA4O43374 803 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 ABHD2P08910 425 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 ACTR2P61160 394 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 COPS2P61201 443 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 KCNJ2P63252 427 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 ZNF268Q14587 947 aaPredicted RBP16.26■□□□□ 0.19
BRCC3-201ENST00000330045 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 PPP1R2P3Q6NXS1 205 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 ABHD15Q6UXT9 468 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 RIBC1Q8N443 379 aaPredicted RBP16.26■□□□□ 0.19
BRCC3-201ENST00000330045 NSUN6Q8TEA1 469 aaKnown RBP16.26■□□□□ 0.19
BRCC3-201ENST00000330045 HAPLN2Q9GZV7 340 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 IBSPP21815 317 aaPredicted RBP16.26■□□□□ 0.19
BRCC3-201ENST00000330045 TMED2Q15363 201 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 XKR3Q5GH77 459 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 KAZNQ674X7 775 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 RCOR2Q8IZ40 523 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 CCHCR1Q8TD31 782 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 MAML1Q92585 1016 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 TBC1D31Q96DN5 1066 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 ZBTB45Q96K62 511 aaPredicted RBP16.26■□□□□ 0.19
BRCC3-201ENST00000330045 CFAP57Q96MR6 1250 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 RXFP1Q9HBX9 757 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 KLHL11Q9NVR0 708 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 IP6K2Q9UHH9 426 aa16.26■□□□□ 0.19
BRCC3-201ENST00000330045 NFASCO94856 1347 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 DOCK5Q9H7D0 1870 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 PI4K2BG5E9Z4 385 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 LIASO43766 372 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 KRT10P13645 584 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 TBXAS1P24557 533 aaPredicted RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 NF2P35240 595 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 POLGP54098 1239 aaPredicted RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 BACE1P56817 501 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 EMC2Q15006 297 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 ATP13A4Q4VNC1 1196 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 MIS18BP1Q6P0N0 1132 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 MOB2Q70IA6 237 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 FITM2Q8N6M3 262 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 ZNF280CQ8ND82 737 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 TMEM143Q96AN5 459 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 SAYSD1Q9NPB0 183 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 KLHL14Q9P2G3 628 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 DNPEPQ9ULA0 475 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 DNALI1O14645 258 aaPredicted RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 LDHAP00338 332 aaKnown RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 RPL7AP62424 266 aaKnown RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 IL9RQ01113 521 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 MTFR1Q15390 333 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 SLFN12LQ6IEE8 588 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
BRCC3-201ENST00000330045 CGB2Q6NT52 195 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 GRAMD1AQ96CP6 724 aa16.25■□□□□ 0.19
BRCC3-201ENST00000330045 KLHL29Q96CT2 875 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms