RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FMO5P49326 533 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 VAMP7P51809 220 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 E4F1Q66K89 784 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 GPD1LQ8N335 351 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 FEZF2Q8TBJ5 459 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 HASPINQ8TF76 798 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 PABPC5Q96DU9 382 aaKnown RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 SNX27Q96L92 541 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 MFSD14AQ96MC6 490 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 ACAP3Q96P50 834 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 RPS6KC1Q96S38 1066 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 CLEC1BQ9P126 229 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 BZW2Q9Y6E2 419 aaKnown RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 EXTL3O43909 919 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 LILRB3O75022 631 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 IPO7O95373 1038 aaKnown RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 CXCL8P10145 99 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 ANXA13P27216 316 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 KRT83P78385 493 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 MRPS5P82675 430 aaKnown RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 POU5F1Q01860 360 aaKnown RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 KCNC3Q14003 757 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 PTPN14Q15678 1187 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 CLUL1Q15846 466 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 RNF168Q8IYW5 571 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 FAM81BQ96LP2 452 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 CBWD1Q9BRT8 395 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 CCDC94Q9BW85 323 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 FAM207AQ9NSI2 230 aaPredicted RBP17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 COG5Q9UP83 839 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 ZNF233A6NK53 670 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 KIF4AO95239 1232 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 CCDC172P0C7W6 258 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 CTSAP10619 480 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 MATR3P43243 847 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 TUSC3Q13454 348 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 SNRNP35Q16560 246 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 DUSP6Q16828 381 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 DNTTIP2Q5QJE6 756 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 ZNF662Q6ZS27 426 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 EFHBQ8N7U6 833 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 C3orf58Q8NDZ4 430 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 NECAB3Q96P71 396 aaPredicted RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 LSM14BQ9BX40 385 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 NGRNQ9NPE2 291 aaKnown RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 PPP2R2CQ9Y2T4 447 aa17.68■□□□□ 0.42
PDLIM1-201ENST00000329399 SSU72P8A0A1W2PR75 194 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 PON1P27169 355 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 ACOT2P49753 483 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 CLCNKBP51801 687 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 KLHDC7AQ5VTJ3 777 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 PDXDC1Q6P996 788 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 CRELD2Q6UXH1 353 aaPredicted RBP17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 BAP1Q92560 729 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 COL25A1Q9BXS0 654 aaPredicted RBP17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 AIPL1Q9NZN9 384 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 CNTN3Q9P232 1028 aa17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 EPN1Q9Y6I3 576 aaPredicted RBP17.67■□□□□ 0.42
PDLIM1-201ENST00000329399 LACTBL1A8MY62 500 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 RNF225M0QZC1 329 aaPredicted RBP17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 C2CD2LO14523 706 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 CLASP2O75122 1294 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 NOL4O94818 638 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 KCNE1P15382 129 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 AP3M2P53677 418 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 WNT7BP56706 349 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 MYL7Q01449 175 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 GOLGA8FQ08AF8 430 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 GOLGA8DPQ0D2H9 430 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 SURF1Q15526 300 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 KYAT1Q16773 422 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 SFMBT2Q5VUG0 894 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 KIAA0319Q5VV43 1072 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 PDE12Q6L8Q7 609 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 RRAGAQ7L523 313 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 PPP1R13BQ96KQ4 1090 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 MSTO1Q9BUK6 570 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 COLEC11Q9BWP8 271 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 GANQ9H2C0 597 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 PCIF1Q9H4Z3 704 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 GCNT4Q9P109 453 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 ADAM28Q9UKQ2 775 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 AGO2Q9UKV8 859 aaKnown RBP17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 ADGRG1Q9Y653 693 aa17.66■□□□□ 0.42
PDLIM1-201ENST00000329399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 EIF3CLB5ME19 914 aaKnown RBP17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 I3L4J1 428 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 OGTO15294 1046 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 SOD2P04179 222 aa17.65■□□□□ 0.42
PDLIM1-201ENST00000329399 CLTAP09496 248 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms