RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 SNRPFP62306 86 aaKnown RBP18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 DYNLT1P63172 113 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 PRKCEQ02156 737 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 NAA25Q14CX7 972 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ZACNQ401N2 412 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 TLDC1Q6P9B6 456 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 MAGEB18Q96M61 343 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ATP6V0A4Q9HBG4 840 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ETNK1Q9HBU6 452 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 RXFP1Q9HBX9 757 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 IVNS1ABPQ9Y6Y0 642 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 A0A1W2PPM1 405 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 TARSP26639 723 aaKnown RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 NFX1Q12986 1120 aaKnown RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 EFTUD2Q15029 972 aaKnown RBP eCLIP18.38■□□□□ 0.531e-6■■■□□ 17.6
PTP4A3-201ENST00000329397 RBBP8NLQ8NC74 664 aaPredicted RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 ERP27Q96DN0 273 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 TMEM121Q9BTD3 319 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 MYLK2Q9H1R3 596 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 KIAA1586Q9HCI6 787 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 FAM47DPA6NHR8 397 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 WNT10BO00744 389 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 SKAP2O75563 359 aaPredicted RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 RGS20O76081 388 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 STBD1O95210 358 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 C4BPAP04003 597 aaKnown RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 KRT1P04264 644 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 MAN1A1P33908 653 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 RPA3P35244 121 aaPredicted RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 MSH2P43246 934 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 CUL2Q13617 745 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 MTFR1Q15390 333 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 ZBED8Q8IZ13 594 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 MAML1Q92585 1016 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 MCEEQ96PE7 176 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 RPAP3Q9H6T3 665 aaPredicted RBP18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 EURLQ9NYK6 297 aa18.38■□□□□ 0.53
PTP4A3-201ENST00000329397 WDR91A4D1P6 747 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 LRRIQ4A6NIV6 560 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 NR3C2P08235 984 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 SFNP31947 248 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 ZNF252P-AS1Q0IIN9 211 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 STRN3Q13033 797 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 LIN9Q5TKA1 542 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 CRELD2Q6UXH1 353 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 SYDE1Q6ZW31 735 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 USP37Q86T82 979 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 SAMD3Q8N6K7 520 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 MAIP1Q8WWC4 291 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 TARS2Q9BW92 718 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 RNF146Q9NTX7 359 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 LGALS13Q9UHV8 139 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 AGO2Q9UKV8 859 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 WDR46O15213 610 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 FGFR1P11362 822 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 OGDHQ02218 1023 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 ZNF449Q6P9G9 518 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 ABRAQ8N0Z2 381 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 UTP4Q969X6 686 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 NTPCRQ9BSD7 190 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 TIPINQ9BVW5 301 aa18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 RBAKQ9NYW8 714 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-201ENST00000329397 TTLL13PA6NNM8 815 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 LIASO43766 372 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 GTF2H1P32780 548 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 SMTNL2Q2TAL5 461 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 SYCP2LQ5T4T6 812 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 CYP4A22Q5TCH4 519 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 TRABD2AQ86V40 505 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 SPIRE2Q8WWL2 714 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 PDGFDQ9GZP0 370 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 TRABDQ9H4I3 376 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 CYP26B1Q9NR63 512 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 HAO1Q9UJM8 370 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 PSTPIP1O43586 416 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 EXTL3O43909 919 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 NRLP54845 237 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 CAV1Q03135 178 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 PTP4A2Q12974 167 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 STAT4Q14765 748 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 SLC1A5Q15758 541 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 KATNAL2Q8IYT4 538 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 TMEM130Q8N3G9 435 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 ZCCHC9Q8N567 271 aaKnown RBP18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 KLF6Q99612 283 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 CCDC77Q9BR77 488 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 ARHGEF3Q9NR81 526 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 PHTF1Q9UMS5 762 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 GOLGA8RI6L899 631 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 MYBL1P10243 752 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 IL9RQ01113 521 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 ASRGL1Q7L266 308 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 ASAP3Q8TDY4 903 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 IFT74Q96LB3 600 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 FAM81BQ96LP2 452 aa18.36■□□□□ 0.53
PTP4A3-201ENST00000329397 EBF2Q9HAK2 575 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms