RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 MMP8P22894 467 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 RWDD2BP57060 319 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 GPS2Q13227 327 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 SIX1Q15475 284 aaPredicted RBP16.88■□□□□ 0.29
PGBD2-201ENST00000329291 C1orf131Q8NDD1 294 aaKnown RBP16.88■□□□□ 0.29
PGBD2-201ENST00000329291 CCDC26Q8TAB7 109 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 TRIM11Q96F44 468 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 NAP1L3Q99457 506 aaPredicted RBP16.88■□□□□ 0.29
PGBD2-201ENST00000329291 HERPUD2Q9BSE4 406 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
PGBD2-201ENST00000329291 RARAP10276 462 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 FLT3P36888 993 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 TM4SF4P48230 202 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 RPL7AP62424 266 aaKnown RBP16.87■□□□□ 0.29
PGBD2-201ENST00000329291 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
PGBD2-201ENST00000329291 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
PGBD2-201ENST00000329291 NNTQ13423 1086 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 SLC13A5Q86YT5 568 aaPredicted RBP16.87■□□□□ 0.29
PGBD2-201ENST00000329291 SMC1BQ8NDV3 1235 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 PIK3R5Q8WYR1 880 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 SEC14L1Q92503 715 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 VCPIP1Q96JH7 1222 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 TWNKQ96RR1 684 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 BCO2Q9BYV7 579 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 TRIM31Q9BZY9 425 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
PGBD2-201ENST00000329291 HMGXB4Q9UGU5 601 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 GJD2Q9UKL4 321 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 GOLGA6BA6NDN3 693 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 ERLIN2O94905 339 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 F2P00734 622 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 PTGIRP43119 386 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 TAS2R40P59535 323 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 BEX3Q00994 111 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 LIN9Q5TKA1 542 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 DENND1BQ6P3S1 775 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 PAXIP1Q6ZW49 1069 aaPredicted RBP16.87■□□□□ 0.29
PGBD2-201ENST00000329291 FAM71BQ8TC56 605 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 AP5M1Q9H0R1 490 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 DPH5Q9H2P9 285 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 ADAM21Q9UKJ8 722 aa16.87■□□□□ 0.29
PGBD2-201ENST00000329291 CA12O43570 354 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 PROSCO94903 275 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 CTGFP29279 349 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 CPT1AP50416 773 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 RAD23BP54727 409 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 DR1Q01658 176 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 HLTFQ14527 1009 aaKnown RBP eCLIP16.86■□□□□ 0.29
PGBD2-201ENST00000329291 ZNF667Q5HYK9 610 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 DDX27Q96GQ7 796 aaKnown RBP16.86■□□□□ 0.29
PGBD2-201ENST00000329291 HHIPL1Q96JK4 782 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 ASB7Q9H672 318 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 CYTH4Q9UIA0 394 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
PGBD2-201ENST00000329291 TCRBV5S1A1TA0A578 114 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 TMEM88BA6NKF7 163 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 RNF40O75150 1001 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 POLR2BP30876 1174 aaKnown RBP16.85■□□□□ 0.29
PGBD2-201ENST00000329291 HSP90B2PQ58FF3 399 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 IQCKQ8N0W5 287 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 ACAP3Q96P50 834 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 OSMRQ99650 979 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 EIF2AQ9BY44 585 aaKnown RBP16.85■□□□□ 0.29
PGBD2-201ENST00000329291 RNF19AQ9NV58 838 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 TJP2Q9UDY2 1190 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 AGAP1Q9UPQ3 857 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 Q9Y3F1 56 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 GOLGA6L10A0A0M3HER8 536 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 TLR3O15455 904 aaKnown RBP16.85■□□□□ 0.29
PGBD2-201ENST00000329291 PHF2O75151 1096 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 NPTXRO95502 500 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 TCF4P15884 667 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 CUL1Q13616 776 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 MFSD10Q14728 455 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 CYP4A22Q5TCH4 519 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 SLC4A11Q8NBS3 891 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 MAGOHBQ96A72 148 aaKnown RBP16.85■□□□□ 0.29
PGBD2-201ENST00000329291 ZIM3Q96PE6 472 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 ELOVL4Q9GZR5 314 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 HES2Q9Y543 173 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 NRCAMQ92823 1304 aa16.85■□□□□ 0.29
PGBD2-201ENST00000329291 MBLAC1A4D2B0 266 aaPredicted RBP16.84■□□□□ 0.29
PGBD2-201ENST00000329291 IGHA2P01877 340 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 SLC1A1P43005 524 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 KCNJ1P48048 391 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 ADAM17P78536 824 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 OGDHQ02218 1023 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 DMTNQ08495 405 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 ZNF252P-AS1Q0IIN9 211 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 DUPD1Q68J44 220 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 ANKS1BQ7Z6G8 1248 aa16.84■□□□□ 0.29
PGBD2-201ENST00000329291 EIF1ADQ8N9N8 165 aaKnown RBP16.84■□□□□ 0.29
PGBD2-201ENST00000329291 FEZF2Q8TBJ5 459 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms