RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ECE2O60344 883 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 YWHABP31946 246 aaKnown RBP17.69■□□□□ 0.42
SSH1-201ENST00000326470 LIN9Q5TKA1 542 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 LVRNQ6Q4G3 990 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 CLNKQ7Z7G1 428 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 PI4K2AQ9BTU6 479 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 SSU72Q9NP77 194 aaKnown RBP17.69■□□□□ 0.42
SSH1-201ENST00000326470 A0A1W2PPM1 405 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 ZC3H11AO75152 810 aaKnown RBP eCLIP17.68■□□□□ 0.42
SSH1-201ENST00000326470 NPTXRO95502 500 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 PDHA1P08559 390 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 KLC1Q07866 573 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 CYP24A1Q07973 514 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 MORF4L2Q15014 288 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 FYB2Q5VWT5 728 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 DRICH1Q6PGQ1 229 aaPredicted RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 C4orf50Q6ZRC1 276 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 MTDHQ86UE4 582 aaKnown RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 TMEM161BQ8NDZ6 487 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 PSMC3IPQ9P2W1 217 aaPredicted RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 STOML1Q9UBI4 398 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 DNPEPQ9ULA0 475 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 UPP2O95045 317 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 ZWINTO95229 277 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 ZSCAN5DPP0CG00 497 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 CETN2P41208 172 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 ARSEP51690 589 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 BPIFB4P59827 614 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 NFX1Q12986 1120 aaKnown RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 MAMLD1Q13495 774 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 PLEKHG4Q58EX7 1191 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 HP1BP3Q5SSJ5 553 aaPredicted RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 MIPEPQ99797 713 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 MRPL47Q9HD33 250 aaKnown RBP17.68■□□□□ 0.42
SSH1-201ENST00000326470 NPHS2Q9NP85 383 aa17.68■□□□□ 0.42
SSH1-201ENST00000326470 NFASCO94856 1347 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 AOC3Q16853 763 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 PODNQ7Z5L7 613 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 NLGN1Q8N2Q7 840 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ALLCQ8N6M5 410 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 SYT15Q9BQS2 421 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ZBTB21Q9ULJ3 1066 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ZNF148Q9UQR1 794 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 TMX2Q9Y320 296 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 TMEM150BA6NC51 233 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ZBED4O75132 1171 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 TROVE2P10155 538 aaKnown RBP eCLIP17.67■□□□□ 0.42
SSH1-201ENST00000326470 NEFHP12036 1026 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 KRT4P19013 534 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 GJC1P36383 396 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 TUBP50607 506 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 SARNPP82979 210 aaKnown RBP17.67■□□□□ 0.42
SSH1-201ENST00000326470 GPS1Q13098 491 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 MAPK6Q16659 721 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 MUM1Q2TAK8 710 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 KHDC1Q4VXA5 237 aaKnown RBP17.67■□□□□ 0.42
SSH1-201ENST00000326470 ZBED8Q8IZ13 594 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ZNF333Q96JL9 665 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 C11orf70Q9BRQ4 267 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 CADM1Q9BY67 442 aaKnown RBP17.67■□□□□ 0.42
SSH1-201ENST00000326470 C1orf112Q9NSG2 853 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 USTQ9Y2C2 406 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 NUMBLQ9Y6R0 609 aa17.67■□□□□ 0.42
SSH1-201ENST00000326470 NVLO15381 856 aaKnown RBP17.66■□□□□ 0.42
SSH1-201ENST00000326470 CCDC22O60826 627 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 DSG3P32926 999 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 SSR1P43307 286 aaKnown RBP17.66■□□□□ 0.42
SSH1-201ENST00000326470 MXRA7P84157 204 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 SPP2Q13103 211 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 EFHC2Q5JST6 749 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 FAM102BQ5T8I3 360 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 CAPN12Q6ZSI9 719 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 CENPUQ71F23 418 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 CEP120Q8N960 986 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 FAM136AQ96C01 138 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 DBNDD1Q9H9R9 158 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 SRCAPQ6ZRS2 3230 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 APBA3O96018 575 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 KRT10P13645 584 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 VHLP40337 213 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 NPTX2P47972 431 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 ZC3H12AQ5D1E8 599 aaKnown RBP17.66■□□□□ 0.42
SSH1-201ENST00000326470 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
SSH1-201ENST00000326470 THEMIS2Q5TEJ8 643 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 PLEKHA7Q6IQ23 1121 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 SLC39A4Q6P5W5 647 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 RFWD3Q6PCD5 774 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 NIPA1Q7RTP0 329 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
SSH1-201ENST00000326470 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 RCOR2Q8IZ40 523 aa17.66■□□□□ 0.42
SSH1-201ENST00000326470 ZBTB10Q96DT7 871 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms