RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 GRM5P41594 1212 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 TM4SF4P48230 202 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 CARSP49589 748 aaKnown RBP20.52■□□□□ 0.88
CHMP6-201ENST00000325167 TMEM132DQ14C87 1099 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 GSPT2Q8IYD1 628 aaKnown RBP20.52■□□□□ 0.88
CHMP6-201ENST00000325167 CASKIN2Q8WXE0 1202 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 IFT81Q8WYA0 676 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 SEC14L1Q92503 715 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 USP6NLQ92738 828 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 KRT35Q92764 455 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 ZFYVE28Q9HCC9 887 aa20.52■□□□□ 0.88
CHMP6-201ENST00000325167 MROH7Q68CQ1 1323 aa20.52■□□□□ 0.87
CHMP6-201ENST00000325167 IGF2BP3O00425 579 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 PSTPIP1O43586 416 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 KRT19P08727 400 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 LACTBP83111 547 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 SREBF2Q12772 1141 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 JADE1Q6IE81 842 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 C17orf99Q6UX52 265 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 TLK2Q86UE8 772 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 C1orf127Q8N9H9 656 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 APBA2Q99767 749 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 C11orf70Q9BRQ4 267 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 AP5M1Q9H0R1 490 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 STRIP2Q9ULQ0 834 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 NFU1Q9UMS0 254 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 MBLAC1A4D2B0 266 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 CCDC85CA6NKD9 419 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 OPA1O60313 960 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 HSF2BPO75031 334 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 NFICP08651 508 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 ZNF865P0CJ78 1059 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 SMIM10L2AP0DMW4 78 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 SMIM10L2BP0DMW5 78 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 ITGA4P13612 1032 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 CD58P19256 250 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 AXLP30530 894 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 POLR2BP30876 1174 aaKnown RBP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 ZNF211Q13398 564 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 TERF2Q15554 542 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 SLC13A5Q86YT5 568 aaPredicted RBP20.51■□□□□ 0.87
CHMP6-201ENST00000325167 LRRC45Q96CN5 670 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 CPB2Q96IY4 423 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 RUFY1Q96T51 708 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 LHX5Q9H2C1 402 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 SETD4Q9NVD3 440 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 IP6K2Q9UHH9 426 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 AMACRQ9UHK6 382 aa20.51■□□□□ 0.87
CHMP6-201ENST00000325167 H3BQF6 201 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 PODXLO00592 558 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 MRPS25P82663 173 aaKnown RBP20.5■□□□□ 0.87
CHMP6-201ENST00000325167 RBP5P82980 135 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 DR1Q01658 176 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 MAMLD1Q13495 774 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 HLTFQ14527 1009 aaKnown RBP eCLIP20.5■□□□□ 0.87
CHMP6-201ENST00000325167 CYP1B1Q16678 543 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 SLC10A6Q3KNW5 377 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
CHMP6-201ENST00000325167 IFNL1Q8IU54 200 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 PASD1Q8IV76 773 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 FEZF2Q8TBJ5 459 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 TSPAN18Q96SJ8 248 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 ADAMTS10Q9H324 1103 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 CHORDC1Q9UHD1 332 aaPredicted RBP20.5■□□□□ 0.87
CHMP6-201ENST00000325167 PCYOX1Q9UHG3 505 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 SIX4Q9UIU6 781 aa20.5■□□□□ 0.87
CHMP6-201ENST00000325167 GNAT1P11488 350 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 CETN2P41208 172 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 FNTAP49354 379 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 DRG2P55039 364 aaKnown RBP20.49■□□□□ 0.87
CHMP6-201ENST00000325167 MFSD10Q14728 455 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 MMS22LQ6ZRQ5 1243 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 RHOT1Q8IXI2 618 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 BTBD6Q96KE9 485 aa20.49■□□□□ 0.87
CHMP6-201ENST00000325167 NXF1Q9UBU9 619 aaKnown RBP20.49■□□□□ 0.87
CHMP6-201ENST00000325167 POLR3GO15318 223 aaPredicted RBP20.48■□□□□ 0.87
CHMP6-201ENST00000325167 KPNA6O60684 536 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 CALCAP01258 141 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 ITGB3P05106 788 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 WEE2P0C1S8 567 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 PYGMP11217 842 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 PSEN2P49810 448 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 WDR72Q3MJ13 1102 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 NOTUMQ6P988 496 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 SLC27A1Q6PCB7 646 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 TMEM192Q8IY95 271 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 C12orf50Q8NA57 414 aaPredicted RBP20.48■□□□□ 0.87
CHMP6-201ENST00000325167 FAM129AQ9BZQ8 928 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 HOMER3Q9NSC5 361 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 KIAA1257Q9ULG3 409 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 ANK1P16157 1881 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 HAS3O00219 553 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 TLR3O15455 904 aaKnown RBP20.48■□□□□ 0.87
CHMP6-201ENST00000325167 CYP2C9P11712 490 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 BRD2P25440 801 aaKnown RBP20.48■□□□□ 0.87
CHMP6-201ENST00000325167 MARCKSL1P49006 195 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 YARSP54577 528 aaKnown RBP20.48■□□□□ 0.87
CHMP6-201ENST00000325167 CATSPER4Q7RTX7 472 aa20.48■□□□□ 0.87
CHMP6-201ENST00000325167 MAGOHBQ96A72 148 aaKnown RBP20.48■□□□□ 0.87
CHMP6-201ENST00000325167 PPP1R16BQ96T49 567 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms