RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 FAM189BP81408 668 aa19.31■□□□□ 0.68
SYNE4-201ENST00000324444 TAP1Q03518 808 aa19.31■□□□□ 0.68
SYNE4-201ENST00000324444 BMS1Q14692 1282 aaKnown RBP19.31■□□□□ 0.68
SYNE4-201ENST00000324444 HGSNATQ68CP4 663 aa19.31■□□□□ 0.68
SYNE4-201ENST00000324444 RTN4RL1Q86UN2 441 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-201ENST00000324444 HPDLQ96IR7 371 aa19.31■□□□□ 0.68
SYNE4-201ENST00000324444 ARHGAP20Q9P2F6 1191 aa19.31■□□□□ 0.68
SYNE4-201ENST00000324444 KANSL3Q9P2N6 904 aa19.31■□□□□ 0.68
SYNE4-201ENST00000324444 TTC3P53804 2025 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 LCHNA4D1U4 455 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 C9IYK1 514 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 RFXAPO00287 272 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 HOXA2O43364 376 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 GJB5O95377 273 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 AMHP03971 560 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 RPL9P32969 192 aaKnown RBP19.3■□□□□ 0.68
SYNE4-201ENST00000324444 EIF4A3P38919 411 aaKnown RBP19.3■□□□□ 0.68
SYNE4-201ENST00000324444 USP8P40818 1118 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 TNNC1P63316 161 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 ARID5AQ03989 594 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 PTK2Q05397 1052 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 FAM117BQ6P1L5 589 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 RAD9BQ6WBX8 426 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
SYNE4-201ENST00000324444 ZNF677Q86XU0 584 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 KREMEN1Q96MU8 473 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 XYLT2Q9H1B5 865 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 HAUS4Q9H6D7 363 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 SIX4Q9UIU6 781 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 NUB1Q9Y5A7 615 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 TRANK1O15050 2925 aa19.3■□□□□ 0.68
SYNE4-201ENST00000324444 INPPL1O15357 1258 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 LRRN2O75325 713 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 LCA5LO95447 670 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 FAM163BP0C2L3 166 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 LRPAP1P30533 357 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 PDE6CP51160 858 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 KIF11P52732 1056 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 CCDC85BQ15834 202 aaPredicted RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 WDR72Q3MJ13 1102 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 SV2CQ496J9 727 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 PPP1R2P3Q6NXS1 205 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 GLB1LQ6UWU2 654 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 ZNF598Q86UK7 904 aaKnown RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 CCAR2Q8N163 923 aaKnown RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 ARNTL2Q8WYA1 636 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 DDX27Q96GQ7 796 aaKnown RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 UROC1Q96N76 676 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 ZMAT2Q96NC0 199 aaKnown RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 PPP1R10Q96QC0 940 aaKnown RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 GPR88Q9GZN0 384 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 APOBEC3GQ9HC16 384 aaKnown RBP19.29■□□□□ 0.68
SYNE4-201ENST00000324444 TMEM161AQ9NX61 479 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 KLK14Q9P0G3 267 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 CNTN6Q9UQ52 1028 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 PPP2R2CQ9Y2T4 447 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 ADGRG1Q9Y653 693 aa19.29■□□□□ 0.68
SYNE4-201ENST00000324444 ANO9A1A5B4 782 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 ARL5CA6NH57 179 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 EPOPA6NHQ4 379 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 KIF2AO00139 706 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-201ENST00000324444 KRT5P13647 590 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 GRIK3Q13003 919 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 SLC18A3Q16572 532 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 C9orf57Q5W0N0 161 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 E4F1Q66K89 784 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-201ENST00000324444 AGMOQ6ZNB7 445 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 SPRED2Q7Z698 418 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 CXorf38Q8TB03 319 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 URGCPQ8TCY9 931 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 RAD9AQ99638 391 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.28■□□□□ 0.68
SYNE4-201ENST00000324444 TSGA10Q9BZW7 698 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 AJAP1Q9UKB5 411 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-201ENST00000324444 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
SYNE4-201ENST00000324444 PIRO00625 290 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 TNFAIP3P21580 790 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 MLH1P40692 756 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 TAF6P49848 677 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 SPOPLQ6IQ16 392 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 ZNF662Q6ZS27 426 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 MICALL1Q8N3F8 863 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 RNF169Q8NCN4 708 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 GAD1Q99259 594 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 BCO2Q9BYV7 579 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 NXF1Q9UBU9 619 aaKnown RBP19.27■□□□□ 0.68
SYNE4-201ENST00000324444 PCDHB7Q9Y5E2 793 aa19.27■□□□□ 0.68
SYNE4-201ENST00000324444 ATP8B3O60423 1300 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-201ENST00000324444 ARHGEF37A1IGU5 675 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 MEIS3P2A8K0S8 358 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 ENPP3O14638 875 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 ASTE1Q2TB18 679 aaPredicted RBP19.26■□□□□ 0.67
SYNE4-201ENST00000324444 GLRA4Q5JXX5 417 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 DPH6Q7L8W6 267 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 KIAA1328Q86T90 577 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 CRIPAKQ8N1N5 446 aa19.26■□□□□ 0.67
SYNE4-201ENST00000324444 AGPAT1Q99943 283 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms