RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ZBTB33Q86T24 672 aa23.71■■□□□ 1.39
PNKP-201ENST00000322344 CCHCR1Q8TD31 782 aa23.71■■□□□ 1.39
PNKP-201ENST00000322344 CABS1Q96KC9 395 aa23.71■■□□□ 1.39
PNKP-201ENST00000322344 INTS9Q9NV88 658 aaKnown RBP23.71■■□□□ 1.39
PNKP-201ENST00000322344 CPSF3Q9UKF6 684 aaKnown RBP23.71■■□□□ 1.39
PNKP-201ENST00000322344 CST3P01034 146 aaPredicted RBP23.7■■□□□ 1.38
PNKP-201ENST00000322344 CHKAP35790 457 aa23.7■■□□□ 1.38
PNKP-201ENST00000322344 CCDC121Q6ZUS5 278 aa23.7■■□□□ 1.38
PNKP-201ENST00000322344 P3H4Q92791 437 aa23.7■■□□□ 1.38
PNKP-201ENST00000322344 MTMR12Q9C0I1 747 aa23.7■■□□□ 1.38
PNKP-201ENST00000322344 IGKV6-21A0A0C4DH24 114 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 O00370 1275 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 TCEA3O75764 348 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 SLCO1A2P46721 670 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 PPARDQ03181 441 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 NFX1Q12986 1120 aaKnown RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 TRPC3Q13507 836 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 DAB2IPQ5VWQ8 1189 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 PLPPR4Q7Z2D5 763 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 RELL1Q8IUW5 271 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 DDX23Q9BUQ8 820 aaKnown RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 TTLL13PA6NNM8 815 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 SLC25A27O95847 323 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 SSTR3P32745 418 aaPredicted RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 MYL6P60660 151 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 COPS2P61201 443 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 YWHAEP62258 255 aaKnown RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 IRX3P78415 501 aaPredicted RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 PLCB4Q15147 1175 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 TRIP13Q15645 432 aaPredicted RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 DNAJC24Q6P3W2 148 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 DRICH1Q6PGQ1 229 aaPredicted RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 GADL1Q6ZQY3 521 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 ZNF317Q96PQ6 595 aaPredicted RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 GPR20Q99678 358 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 ACTR5Q9H9F9 607 aaPredicted RBP23.69■■□□□ 1.38
PNKP-201ENST00000322344 CISHQ9NSE2 258 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 TMEM51Q9NW97 253 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 PCDHGC3Q9UN70 934 aa23.69■■□□□ 1.38
PNKP-201ENST00000322344 ABLIM1O14639 778 aa23.68■■□□□ 1.38
PNKP-201ENST00000322344 ACSL3O95573 720 aa23.68■■□□□ 1.38
PNKP-201ENST00000322344 CD58P19256 250 aa23.68■■□□□ 1.38
PNKP-201ENST00000322344 CDH5P33151 784 aaPredicted RBP23.68■■□□□ 1.38
PNKP-201ENST00000322344 LY6KQ17RY6 165 aa23.68■■□□□ 1.38
PNKP-201ENST00000322344 RNF149Q8NC42 400 aa23.68■■□□□ 1.38
PNKP-201ENST00000322344 IPO4Q8TEX9 1081 aaKnown RBP23.68■■□□□ 1.38
PNKP-201ENST00000322344 CEP83Q9Y592 693 aa23.68■■□□□ 1.38
PNKP-201ENST00000322344 TCRBV5S1A1TA0A578 114 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 IRF6O14896 467 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 ASAP2O43150 1006 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 PEX10O60683 326 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 TJP3O95049 919 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 SRGAP2CP0DJJ0 459 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 EIF4BP23588 611 aaKnown RBP23.67■■□□□ 1.38
PNKP-201ENST00000322344 PTPN7P35236 360 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 GJC1P36383 396 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 MKRN4PQ13434 485 aaPredicted RBP23.67■■□□□ 1.38
PNKP-201ENST00000322344 CAPN7Q9Y6W3 813 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 PTPRFP10586 1907 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 LRRC37A2A6NM11 1700 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 NOP56O00567 594 aaKnown RBP23.67■■□□□ 1.38
PNKP-201ENST00000322344 TFDP1Q14186 410 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 PIGHQ14442 188 aaPredicted RBP23.67■■□□□ 1.38
PNKP-201ENST00000322344 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
PNKP-201ENST00000322344 IZUMO3Q5VZ72 239 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 MPZL3Q6UWV2 235 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 TSHZ1Q6ZSZ6 1077 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 SLITRK1Q96PX8 696 aa23.67■■□□□ 1.38
PNKP-201ENST00000322344 DDX56Q9NY93 547 aaKnown RBP23.67■■□□□ 1.38
PNKP-201ENST00000322344 A0A0G2JLL6 359 aaPredicted RBP23.66■■□□□ 1.38
PNKP-201ENST00000322344 TNNC2P02585 160 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 KRT1P04264 644 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 PROZP22891 400 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 KLRC2P26717 231 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 RPL7AP62424 266 aaKnown RBP23.66■■□□□ 1.38
PNKP-201ENST00000322344 ACTN3Q08043 901 aaPredicted RBP23.66■■□□□ 1.38
PNKP-201ENST00000322344 LONRF1Q17RB8 773 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 DCUN1D2Q6PH85 259 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 PRRT2Q7Z6L0 340 aaPredicted RBP23.66■■□□□ 1.38
PNKP-201ENST00000322344 EXOC3L1Q86VI1 746 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 FAM212AQ96EL1 285 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 NINJ2Q9NZG7 142 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 ACKR2O00590 384 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 GJB6O95452 261 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 BRD2P25440 801 aaKnown RBP23.66■■□□□ 1.38
PNKP-201ENST00000322344 SLC26A2P50443 739 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 CNGA2Q16280 664 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 ZNF699Q32M78 642 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 GSTA5Q7RTV2 222 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 CNPY4Q8N129 248 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 NIPA2Q8N8Q9 360 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 SGIP1Q9BQI5 828 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 STRIP2Q9ULQ0 834 aa23.66■■□□□ 1.38
PNKP-201ENST00000322344 ZBTB42B2RXF5 422 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 NDC80O14777 642 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 LIASO43766 372 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 B4GALT4O60513 344 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 HOXC6P09630 235 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 MARK3P27448 753 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 KYNUQ16719 465 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms