RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MDH1BQ5I0G3 518 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 TMC2Q8TDI7 906 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 HEY1Q9Y5J3 304 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 LRP6O75581 1613 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 USP54Q70EL1 1684 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 CST8O60676 142 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 CYP1A2P05177 515 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 CPA2P48052 419 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 MORF4L2Q15014 288 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 ZDHHC24Q6UX98 284 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 DEPDC1BQ8WUY9 529 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 AGBL1Q96MI9 1066 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 PWWP2AQ96N64 755 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 INO80BQ9C086 356 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 NGRNQ9NPE2 291 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 SLC24A2Q9UI40 661 aa13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 XPO7Q9UIA9 1087 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 APOBEC2Q9Y235 224 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-202ENST00000321117 FSCN2O14926 492 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 PSMD10O75832 226 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 KRT3P12035 628 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 PTGIRP43119 386 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 NPTX2P47972 431 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 BZW1Q7L1Q6 419 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 PPIL6Q8IXY8 311 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 MIPOL1Q8TD10 442 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 PARD3BQ8TEW8 1205 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ZNF317Q96PQ6 595 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ATP8B3O60423 1300 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 A6NJR5 290 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 GH1P01241 217 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 FMO1Q01740 532 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ROR1Q01973 937 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 NCOA4Q13772 614 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 SURF1Q15526 300 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 SH2D4BQ5SQS7 431 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 WASHC2DQ5SRD0 308 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 WLSQ5T9L3 541 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 THNSL1Q8IYQ7 743 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 MKL1Q969V6 931 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ACTL7BQ9Y614 415 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 CHD4Q14839 1912 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 PECAM1P16284 738 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 GARSP41250 739 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 BNIP1Q12981 228 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 SLC15A2Q16348 729 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 SHC3Q92529 594 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 ADPGKQ9BRR6 497 aa13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 AVENQ9NQS1 362 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-202ENST00000321117 DNALI1O14645 258 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 GTF2H1P32780 548 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 YARSP54577 528 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 THOC5Q13769 683 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 LRRC23Q53EV4 343 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 NXNQ6DKJ4 435 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 ACAP3Q96P50 834 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 H3BRJ5 948 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 C21orf2O43822 256 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 SRGAP2CP0DJJ0 459 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 ACADSP16219 412 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 PSMC4P43686 418 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 TKFCQ3LXA3 575 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 DCAF12L1Q5VU92 463 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 RGS9BPQ6ZS82 235 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 INPP5DQ92835 1189 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 FAM111AQ96PZ2 611 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 PCDHB18PQ96TA0 734 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 WDR18Q9BV38 432 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 CYP26B1Q9NR63 512 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 RNF146Q9NTX7 359 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 ASNSD1Q9NWL6 643 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 STARD13Q9Y3M8 1113 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 ZNF268Q14587 947 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 PSMD6Q15008 389 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 SMTNL2Q2TAL5 461 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 HSP90AA5PQ58FG0 334 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 FAM160B1Q5W0V3 765 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 FITM2Q8N6M3 262 aa13.4□□□□□ -0.26
DNMT3A-202ENST00000321117 TMEM121Q9BTD3 319 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms