RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C4orf22Q6V702 233 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 FAR2Q96K12 515 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 RBM12Q9NTZ6 932 aaKnown RBP17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 KIAA0391O15091 583 aaKnown RBP17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 STX5Q13190 355 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SNX31Q8N9S9 440 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 TNIP3Q96KP6 325 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 TRIM51Q9BSJ1 452 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 PLEKHA7Q6IQ23 1121 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 MAGEB18Q96M61 343 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 UTYO14607 1347 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 PREX2Q70Z35 1606 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 PDXKO00764 312 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 USP10Q14694 798 aaKnown RBP17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 SIK2Q9H0K1 926 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 IL1RL2Q9HB29 575 aa17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
SMCHD1-201ENST00000320876 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 TALDO1P37837 337 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 RGS4P49798 205 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 SIK1P57059 783 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 IFNEQ86WN2 208 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 MCEEQ96PE7 176 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 VPS9D1Q9Y2B5 631 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 DTNAQ9Y4J8 743 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 MTA3Q9BTC8 594 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 ITGB1BP2Q9UKP3 347 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 AGO2Q9UKV8 859 aaKnown RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 SULT1E1P49888 294 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 CHI3L2Q15782 390 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 C12orf60Q5U649 245 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 MED15Q96RN5 788 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 ISCUQ9H1K1 167 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 USP11P51784 963 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 SGSM1Q2NKQ1 1148 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 BTBD8Q5XKL5 378 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 LATS2Q9NRM7 1088 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 PAK5Q9P286 719 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 CLPTM1O96005 669 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 MIGA2Q7L4E1 593 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 FRMD8Q9BZ67 464 aaPredicted RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 ALDH8A1Q9H2A2 487 aaPredicted RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 MBD2Q9UBB5 411 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 DNALI1O14645 258 aaPredicted RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 PEX5P50542 639 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 GRM4Q14833 912 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 SNRNP27Q8WVK2 155 aaKnown RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 HNRNPLLQ8WVV9 542 aaKnown RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 DCLRE1BQ9H816 532 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 BCS1LQ9Y276 419 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 CENPCQ03188 943 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 COG2Q14746 738 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 NAA30Q147X3 362 aaPredicted RBP17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 KDM7AQ6ZMT4 941 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 TUFT1Q9NNX1 390 aa17.61■□□□□ 0.41
SMCHD1-201ENST00000320876 ASNA1O43681 348 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 MTF1Q14872 753 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 EIF2AK1Q9BQI3 630 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 NQO1P15559 274 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 ATXN3P54252 364 aaPredicted RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 PTK6Q13882 451 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 KANSL1LA0AUZ9 987 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 SAC3D1A6NKF1 404 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 FCGR1AP12314 374 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 CNPY3Q9BT09 278 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 KLHL11Q9NVR0 708 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 FBXO40Q9UH90 709 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 CSPG5O95196 566 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 SCUBE1Q8IWY4 988 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 E2F7Q96AV8 911 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 APBA3O96018 575 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 GRK2P25098 689 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 NAB2Q15742 525 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 TRAPPC11Q7Z392 1133 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 LINC00523Q86TU6 105 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 NLGN1Q8N2Q7 840 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 PARVBQ9HBI1 364 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 RGL1Q9NZL6 768 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 KCND2Q9NZV8 630 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 A0A1W2PQJ5 194 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 PSMC5P62195 406 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 TTC30AQ86WT1 665 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 RTL3Q8N8U3 475 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 MRPL48Q96GC5 212 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 FAM217BQ9NTX9 383 aaPredicted RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 FOXP4Q8IVH2 680 aaPredicted RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 STRBPQ96SI9 672 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 UTP6Q9NYH9 597 aaKnown RBP17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 CEP152O94986 1710 aa17.6■□□□□ 0.41
SMCHD1-201ENST00000320876 MAP3K4Q9Y6R4 1608 aa17.59■□□□□ 0.41
SMCHD1-201ENST00000320876 MYL3P08590 195 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms