RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 ARHGEF26Q96DR7 871 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 SAMD15Q9P1V8 674 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 PLAAQ9Y263 795 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 REXO2Q9Y3B8 237 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 SCN7AQ01118 1682 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 GZMAP12544 262 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 CARSP49589 748 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 TAF6P49848 677 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 ATN1P54259 1190 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 ZBTB16Q05516 673 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 CACNB2Q08289 660 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 NNTQ13423 1086 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 ZBTB41Q5SVQ8 909 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 MICAL1Q8TDZ2 1067 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 HASPINQ8TF76 798 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 CDT1Q9H211 546 aa9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 PRDM5Q9NQX1 630 aaPredicted RBP9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 METTL5Q9NRN9 209 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-201ENST00000319172 FRMD3A2A2Y4 597 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ARIH2O95376 493 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 GJB6O95452 261 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MCF2P10911 925 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 GGCXP38435 758 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SLC1A1P43005 524 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 BCAR1P56945 870 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SARNPP82979 210 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 GCNT1Q02742 428 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MAPK7Q13164 816 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 TFDP2Q14188 446 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 HHATQ5VTY9 493 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 TDRD10Q5VZ19 366 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 GLB1LQ6UWU2 654 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 EPM2AIP1Q7L775 607 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ANKRD23Q86SG2 305 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 CNPY4Q8N129 248 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 EMC1Q8N766 993 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 P3H4Q92791 437 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 TLR10Q9BXR5 811 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SIK2Q9H0K1 926 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SLITRK6Q9H5Y7 841 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 TMEM134Q9H6X4 195 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 NOVA2Q9UNW9 492 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 DDX60Q8IY21 1712 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 TLR2O60603 784 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MOCS2O96007 188 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ICAM3P32942 547 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MTM1Q13496 603 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SYCP2LQ5T4T6 812 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ARHGEF18Q6ZSZ5 1173 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 EPS8L1Q8TE68 723 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SEMA4DQ92854 862 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 OSBPL8Q9BZF1 889 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 STAP1Q9ULZ2 295 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 TIMM13Q9Y5L4 95 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 RPTORQ8N122 1335 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ALDH1A1P00352 501 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 NFICP08651 508 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SMIM10L2AP0DMW4 78 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SMIM10L2BP0DMW5 78 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 FLT3LGP49771 235 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 INHBEP58166 350 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 KRT17Q04695 432 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 GPS1Q13098 491 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 DUSP28Q4G0W2 176 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ANKS4BQ8N8V4 417 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ACO2Q99798 780 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 CAPS2Q9BXY5 557 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 DHX33Q9H6R0 707 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 PPME1Q9Y570 386 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ATP8B3O60423 1300 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 NOL4O94818 638 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 CPB1P15086 417 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 PHBP35232 272 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 OR1G1P47890 313 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 PTENP60484 403 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 KCNT1Q5JUK3 1230 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SLC27A1Q6PCB7 646 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 ANKRD7Q92527 254 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 SAYSD1Q9NPB0 183 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 WDR35Q9P2L0 1181 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 MYH6P13533 1939 aa9.82□□□□□ -0.84
TMEM39A-201ENST00000319172 COL4A1P02462 1669 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ZBBXA8MT70 800 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 RALAP11233 206 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 EIF4BP23588 611 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 STX2P32856 288 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 MARSP56192 900 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 RTP1P59025 263 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 PTPN11Q06124 597 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 SLMAPQ14BN4 828 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ARL13BQ3SXY8 428 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 SV2CQ496J9 727 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 MTHFD1LQ6UB35 978 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 CCNI2Q6ZMN8 369 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 IRF2BP2Q7Z5L9 587 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms