RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ALDH2P05091 517 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 GALTP07902 379 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 ATICP31939 592 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 SOWAHAQ2M3V2 549 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 CISHQ9NSE2 258 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 PDE4DIPQ5VU43 2346 aa16.49■□□□□ 0.23
PDLIM5-202ENST00000318007 CYP26A1O43174 497 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 PDGFRBP09619 1106 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 RPL9P32969 192 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 PNPLA4P41247 253 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 TRIM14Q14142 442 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 WSCD1Q658N2 575 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 APPL2Q8NEU8 664 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 OR6B3Q8NGW1 331 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 SLC9A7Q96T83 725 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 LPIN3Q9BQK8 851 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 MARCH5Q9NX47 278 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 REV3LO60673 3130 aa16.48■□□□□ 0.23
PDLIM5-202ENST00000318007 HUS1O60921 280 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 ACAT1P24752 427 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 PBX2P40425 430 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 ZBED6P86452 979 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 GCNT1Q02742 428 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 CD300LGQ6UXG3 332 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 CNGA4Q8IV77 575 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 TWNKQ96RR1 684 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 TSPAN18Q96SJ8 248 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 STK33Q9BYT3 514 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 GPR62Q9BZJ7 368 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 IMPACTQ9P2X3 320 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 ADAM28Q9UKQ2 775 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 C2CD2LO14523 706 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 P4HA1P13674 534 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 TBXAS1P24557 533 aaPredicted RBP16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 LMO2P25791 158 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 JAM2P57087 298 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 FIGNQ5HY92 759 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 SFMBT2Q5VUG0 894 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 TAF3Q5VWG9 929 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 DCLRE1AQ6PJP8 1040 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 KCNT2Q6UVM3 1135 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 SLC47A2Q86VL8 602 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 ADGRF2Q8IZF7 708 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 PDCL2Q8N4E4 241 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 FIBCD1Q8N539 461 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 TAF4BQ92750 862 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 DDX27Q96GQ7 796 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 UROC1Q96N76 676 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 DPEP3Q9H4B8 488 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 CERS4Q9HA82 394 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 NME7Q9Y5B8 376 aa16.47■□□□□ 0.23
PDLIM5-202ENST00000318007 A0A1W2PQJ5 194 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 CA3P07451 260 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 CA8P35219 290 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 SOX5P35711 763 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 NDST1P52848 882 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 FAM171A1Q5VUB5 890 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 TAS1R1Q7RTX1 841 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 PPP1R9BQ96SB3 815 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 CHP1Q99653 195 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 GDF15Q99988 308 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 BCO2Q9BYV7 579 aa16.46■□□□□ 0.23
PDLIM5-202ENST00000318007 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 STAT1P42224 750 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 ASIC2Q16515 512 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 TSR1Q2NL82 804 aaKnown RBP16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 RBBP8NLQ8NC74 664 aaPredicted RBP16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 OR8K1Q8NGG5 319 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 KBTBD7Q8WVZ9 684 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 SHC3Q92529 594 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 RAD9AQ99638 391 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 VRTNQ9H8Y1 702 aa16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.22
PDLIM5-202ENST00000318007 A8MXQ7 604 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 DNAJB2P25686 324 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 WDR59Q6PJI9 974 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 OSTM1Q86WC4 334 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 GLYCTKQ8IVS8 523 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 C12orf29Q8N999 325 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 ZNF558Q96NG5 402 aa16.45■□□□□ 0.22
PDLIM5-202ENST00000318007 GBF1Q92538 1859 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms