RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FAM161BQ96MY7 647 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 MIPEPQ99797 713 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 NARFQ9UHQ1 456 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 NFASCO94856 1347 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CRABP2P29373 138 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 STAT3P40763 770 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PRELPP51888 382 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PLCB3Q01970 1234 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 LSAMPQ13449 338 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TRIP13Q15645 432 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ADGRD1Q6QNK2 874 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KYAT3Q6YP21 454 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 MCOLN2Q8IZK6 566 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PYROXD1Q8WU10 500 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DDX17Q92841 729 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 C1orf21Q9H246 121 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 C1orf112Q9NSG2 853 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 SOX13Q9UN79 622 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 RALAP11233 206 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ADCY1Q08828 1119 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TBC1D25Q3MII6 688 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF746Q6NUN9 644 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DPP8Q6V1X1 898 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 MAEAQ7L5Y9 396 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ZBED8Q8IZ13 594 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC43Q8N309 656 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DDI1Q8WTU0 396 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 LENG9Q96B70 501 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ECSITQ9BQ95 431 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 GPR88Q9GZN0 384 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DHX33Q9H6R0 707 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TMEM8AQ9HCN3 771 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DDX56Q9NY93 547 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 VAV3Q9UKW4 847 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 SNED1Q8TER0 1413 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 NUP188Q5SRE5 1749 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 K7ENM7 598 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CYP26A1O43174 497 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PFDN1O60925 122 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KRT38O76015 456 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 LYPLA2O95372 231 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 EEF2P13639 858 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PDIA2Q13087 525 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KLF1Q13351 362 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 HNRNPDQ14103 355 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DDB1Q16531 1140 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 HIF1AQ16665 826 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 SLC4A8Q2Y0W8 1093 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 WDR44Q5JSH3 913 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TMEM63BQ5T3F8 832 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ZFYVE27Q5T4F4 411 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CCDC33Q8N5R6 958 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 BANPQ8N9N5 519 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TTC8Q8TAM2 541 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PTCD3Q96EY7 689 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 STRA6Q9BX79 667 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 NPHS2Q9NP85 383 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KRT82Q9NSB4 513 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DCTN4Q9UJW0 460 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PHF24Q9UPV7 400 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KLHL2O95198 593 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 SERPINB8P50452 374 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 VCPP55072 806 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ANO5Q75V66 913 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 UCMAQ8WVF2 138 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ZFRQ96KR1 1074 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CD209Q9NNX6 404 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PLK2Q9NYY3 685 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 FAM200BP0CF97 657 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PIM1P11309 404 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 IL1R1P14778 569 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KLRK1P26718 216 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PTPN7P35236 360 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 HSPA13P48723 471 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CTC1Q2NKJ3 1217 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CFAP157Q5JU67 520 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 DHDDSQ86SQ9 333 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 WDR75Q8IWA0 830 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PALM2Q8IXS6 379 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PPIL6Q8IXY8 311 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 APOPT1Q96IL0 206 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TEKT3Q9BXF9 490 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TMEM117Q9H0C3 514 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 GALNT8Q9NY28 637 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 FAM196BA6NMK8 535 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 RSPH10B2B2RC85 870 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 RSPH10BP0C881 870 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 ANPEPP15144 967 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 VAV1P15498 845 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KRT4P19013 534 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 SERPINB3P29508 390 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 TAP1Q03518 808 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 C1QBPQ07021 282 aaKnown RBP5.03□□□□□ -1.6
PTPN13-201ENST00000316707 HIC1Q14526 733 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CEP55Q53EZ4 464 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 SYDE2Q5VT97 1194 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 C1orf146Q5VVC0 180 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 PADI6Q6TGC4 694 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 CCNJLQ8IV13 435 aa5.03□□□□□ -1.6
PTPN13-201ENST00000316707 KIAA0825Q8IV33 1275 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms