RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PCYT1AP49585 367 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 AP3M2P53677 418 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 KCNMA1Q12791 1236 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 DHX34Q14147 1143 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 C11orf63Q6NUN7 778 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 SV2BQ7L1I2 683 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CRNNQ9UBG3 495 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 MOSPD1Q9UJG1 213 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 DMTF1Q9Y222 760 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 GDAQ9Y2T3 454 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 RBMX2Q9Y388 322 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CCDC194A0A1B0GVG4 234 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CCDC169A6NNP5 214 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CDK2AP1O14519 115 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 RGS16O15492 202 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 TRMUO75648 421 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 FAM155BO75949 473 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 AGTP01019 485 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CYP3A4P08684 503 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 ENO2P09104 434 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 OCM2P0CE71 109 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 OCMP0CE72 109 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 KRT4P19013 534 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 UBA7P41226 1012 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 KLHL7Q8IXQ5 586 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 PTCD2Q8WV60 388 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 EME1Q96AY2 570 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 VMP1Q96GC9 406 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 MYL10Q9BUA6 226 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 NOC4LQ9BVI4 516 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 OLFML3Q9NRN5 406 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 TYW1Q9NV66 732 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 TRNAU1APQ9NX07 287 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 UVRAGQ9P2Y5 699 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 ANGPTL2Q9UKU9 493 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 ARHGAP10A1A4S6 786 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 UBE2Q2LH0YL09 131 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PDXKO00764 312 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 SH3BP5O60239 455 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 FOXD2O60548 495 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 PGM3O95394 542 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 TGFB3P10600 412 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 CDH3P22223 829 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 TCEA1P23193 301 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 PCSK6P29122 969 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 CRABP2P29373 138 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 RCVRNP35243 200 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 RPL5P46777 297 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 POLGP54098 1239 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 MKRN3Q13064 507 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 ZNF174Q15697 407 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PHKG1Q16816 387 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 TTC23LQ6PF05 361 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 DSTYKQ6XUX3 929 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PIK3AP1Q6ZUJ8 805 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PNMA1Q8ND90 353 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 LARP4BQ92615 738 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 ARHGEF2Q92974 986 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 FNBP1Q96RU3 617 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 RBM38Q9H0Z9 239 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 EHD1Q9H4M9 534 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 AZI2Q9H6S1 392 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PPCSQ9HAB8 311 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 GIN1Q9NXP7 522 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 SLAIN2Q9P270 581 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 IKBKGQ9Y6K9 419 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PARP14Q460N5 1801 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 MYH10P35580 1976 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 PFDN6O15212 129 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 FARP2O94887 1054 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 PTPN4P29074 926 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 TM4SF1P30408 202 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 RPS3AP61247 264 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 IFI35P80217 286 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 PPP2R5CQ13362 524 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 TMEM266Q2M3C6 531 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 C15orf59Q2T9L4 293 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 CCDC14Q49A88 953 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 ZNF449Q6P9G9 518 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 SYDE1Q6ZW31 735 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 COL23A1Q86Y22 540 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 LILRB1Q8NHL6 650 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 CTRCQ99895 268 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 LBHD1Q9BQE6 289 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 GPATCH1Q9BRR8 931 aaKnown RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 ROPN1BQ9BZX4 212 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 TMEM60Q9H2L4 133 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 ROPN1Q9HAT0 212 aaPredicted RBP7□□□□□ -1.29
ZNF540-201ENST00000316433 LRP2BPQ9P2M1 347 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 KLHL3Q9UH77 587 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 NFASCO94856 1347 aa7□□□□□ -1.29
ZNF540-201ENST00000316433 TLDC2A0PJX2 215 aa6.99□□□□□ -1.29
ZNF540-201ENST00000316433 CFAP69A5D8W1 941 aa6.99□□□□□ -1.29
ZNF540-201ENST00000316433 AP3B1O00203 1094 aa6.99□□□□□ -1.29
ZNF540-201ENST00000316433 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
ZNF540-201ENST00000316433 DDX3XO00571 662 aaKnown RBP eCLIP6.99□□□□□ -1.29
ZNF540-201ENST00000316433 ARHGAP33O14559 1287 aa6.99□□□□□ -1.29
ZNF540-201ENST00000316433 B4GALT4O60513 344 aa6.99□□□□□ -1.29
ZNF540-201ENST00000316433 TMCC2O75069 709 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms