RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MRPL47Q9HD33 250 aaKnown RBP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 MED4Q9NPJ6 270 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 TCRBV7S2A1N4TA0A589 114 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 PROSCO94903 275 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GJB6O95452 261 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 HSPA6P17066 643 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 HOXA11P31270 313 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 SLC1A1P43005 524 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 YWHAEP62258 255 aaKnown RBP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 CUL1Q13616 776 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 HLTFQ14527 1009 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 MFSD10Q14728 455 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 TMEM132DQ14C87 1099 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GLIPR1L2Q4G1C9 344 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 DAB2IPQ5VWQ8 1189 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 SLC13A5Q86YT5 568 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 WDTC1Q8N5D0 677 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 RIN2Q8WYP3 895 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GJD2Q9UKL4 321 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GOLGA6BA6NDN3 693 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 LSM8O95777 96 aaKnown RBP19.52■□□□□ 0.72
CCDC43-201ENST00000315286 FAM193AP78312 1265 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 RUFY4Q6ZNE9 571 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 EIF1ADQ8N9N8 165 aaKnown RBP19.52■□□□□ 0.72
CCDC43-201ENST00000315286 TMEM35BQ8NCS4 154 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 FAM71BQ8TC56 605 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 GCOM2Q9BZD3 368 aaPredicted RBP19.52■□□□□ 0.72
CCDC43-201ENST00000315286 SMYD3Q9H7B4 428 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 PCDHGC3Q9UN70 934 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 FAN1Q9Y2M0 1017 aa19.52■□□□□ 0.72
CCDC43-201ENST00000315286 MBLAC1A4D2B0 266 aaPredicted RBP19.52■□□□□ 0.71
CCDC43-201ENST00000315286 DAPK3O43293 454 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 CYP2C9P11712 490 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 POLR2BP30876 1174 aaKnown RBP19.52■□□□□ 0.71
CCDC43-201ENST00000315286 LACTBP83111 547 aaPredicted RBP19.52■□□□□ 0.71
CCDC43-201ENST00000315286 BEX3Q00994 111 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 DR1Q01658 176 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 WHAMMQ8TF30 809 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 SEC14L1Q92503 715 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 OSMRQ99650 979 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 TRIM51Q9BSJ1 452 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 PARVAQ9NVD7 372 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 VPS18Q9P253 973 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 SCINQ9Y6U3 715 aa19.52■□□□□ 0.71
CCDC43-201ENST00000315286 CENPFP49454 3210 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 SMIM35A0A1B0GVV1 85 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 TLR3O15455 904 aaKnown RBP19.51■□□□□ 0.71
CCDC43-201ENST00000315286 PHF2O75151 1096 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 NPTXRO95502 500 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 ATICP31939 592 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 RGS2P41220 211 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 GRM5P41594 1212 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 RAD23BP54727 409 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 LLGL1Q15334 1064 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 FEZF2Q8TBJ5 459 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC43-201ENST00000315286 C18orf8Q96DM3 657 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 FAXDC2Q96IV6 333 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 ZNF518BQ9C0D4 1074 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 NEUROG2Q9H2A3 272 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 CXCL16Q9H2A7 254 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 VRTNQ9H8Y1 702 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 AGAP1Q9UPQ3 857 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 UTP11Q9Y3A2 253 aaKnown RBP19.51■□□□□ 0.71
CCDC43-201ENST00000315286 C2CD2Q9Y426 696 aa19.51■□□□□ 0.71
CCDC43-201ENST00000315286 MYL3P08590 195 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 SLC10A3P09131 477 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 CD19P15391 556 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 EIF4BP23588 611 aaKnown RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 CDH5P33151 784 aaPredicted RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 PSEN2P49810 448 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 RPL7AP62424 266 aaKnown RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 ADAM17P78536 824 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 CDC42EP1Q00587 391 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 ORC1Q13415 861 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 SMYD5Q6GMV2 418 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 CATSPER4Q7RTX7 472 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 MAGOHBQ96A72 148 aaKnown RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 HPDLQ96IR7 371 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 DPP3Q9NY33 737 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 HAS3O00219 553 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 CALB1P05937 261 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 RARAP10276 462 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 CPT1AP50416 773 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 SIX1Q15475 284 aaPredicted RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 DCAF4L1Q3SXM0 396 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 DENND1BQ6P3S1 775 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 DNAJB3Q8WWF6 145 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 DDX27Q96GQ7 796 aaKnown RBP19.5■□□□□ 0.71
CCDC43-201ENST00000315286 TWNKQ96RR1 684 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 DPH5Q9H2P9 285 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 ZFYVE28Q9HCC9 887 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 HMGXB4Q9UGU5 601 aa19.5■□□□□ 0.71
CCDC43-201ENST00000315286 TCRBV5S1A1TA0A578 114 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 O00370 1275 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 TNPO2O14787 897 aaKnown RBP19.49■□□□□ 0.71
CCDC43-201ENST00000315286 IGHA2P01877 340 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 CHRNA3P32297 505 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 PTGIRP43119 386 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms