RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PDXDC1Q6P996 788 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 ZBED8Q8IZ13 594 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 NLGN2Q8NFZ4 835 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 CLMNQ96JQ2 1002 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 SLC9A1P19634 815 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 IKBKEQ14164 716 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 ARMC6Q6NXE6 501 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 LMNTD2Q8IXW0 634 aa14.18□□□□□ -0.14
RFFL-201ENST00000315249 SYNCRIPO60506 623 aaKnown RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 TBC1D1Q86TI0 1168 aaPredicted RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 SLC35G2Q8TBE7 412 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 ERLEC1Q96DZ1 483 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 KANSL3Q9P2N6 904 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 RHOBTB3O94955 611 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 RALBP11234 206 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 CASP4P49662 377 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 DPP7Q9UHL4 492 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 EGFRP00533 1210 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 POLD3Q15054 466 aaPredicted RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 LATS2Q9NRM7 1088 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 AGPAT3Q9NRZ7 376 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 HPS5Q9UPZ3 1129 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 IPPQ9Y573 584 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 RASA4BC9J798 803 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 RASA4O43374 803 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 SEMA3FQ13275 785 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 CUL1Q13616 776 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 TRPM5Q9NZQ8 1165 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 PCDHB2Q9Y5E7 798 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 MX2P20592 715 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 IPMKQ8NFU5 416 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 WHAMMQ8TF30 809 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 NCLNQ969V3 563 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 BPIFA3Q9BQP9 254 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 EMILIN2Q9BXX0 1053 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 ZNF212Q9UDV6 495 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 ZNF197O14709 1029 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 RNASEH1O60930 286 aaKnown RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 C6orf118Q5T5N4 469 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 ZNF280DQ6N043 979 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 GJB7Q6PEY0 223 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 LZICQ8WZA0 190 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 POP1Q99575 1024 aaKnown RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 CINPQ9BW66 212 aaPredicted RBP14.17□□□□□ -0.14
RFFL-201ENST00000315249 FHOD1Q9Y613 1164 aa14.17□□□□□ -0.14
RFFL-201ENST00000315249 GPD1P21695 349 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 CSE1LP55060 971 aaKnown RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 RPL10AP62906 217 aaKnown RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 MUM1Q2TAK8 710 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 IQSEC1Q6DN90 963 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 DEFB118Q96PH6 123 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 OSBPL9Q96SU4 736 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 RAB6BQ9NRW1 208 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 F5H5T6 163 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 SP100P23497 879 aaPredicted RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 EPHB2P29323 1055 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 EFEMP1Q12805 493 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 REPS2Q8NFH8 660 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 SLC4A9Q96Q91 983 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 DDX47Q9H0S4 455 aaKnown RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 SMIM24O75264 130 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 MDH1BQ5I0G3 518 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 ANKMY2Q8IV38 441 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 RCOR2Q8IZ40 523 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 TMEM199Q8N511 208 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 LZTS3O60299 673 aaPredicted RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 HSPA8P11142 646 aaKnown RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 MED4Q9NPJ6 270 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 KRT82Q9NSB4 513 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 DSEQ9UL01 958 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 ARHGAP10A1A4S6 786 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 GFAPP14136 432 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 SNRPFP62306 86 aaKnown RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 GRIN1Q05586 938 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 VCX3AQ9NNX9 186 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 SENP1Q9P0U3 644 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 SALL1Q9NSC2 1324 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 MSCO60682 206 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 ADSSL1Q8N142 457 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 TINF2Q9BSI4 451 aa14.16□□□□□ -0.14
RFFL-201ENST00000315249 CHORDC1Q9UHD1 332 aaPredicted RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.16□□□□□ -0.14
RFFL-201ENST00000315249 TYK2P29597 1187 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 SCFD1Q8WVM8 642 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 CXCL8P10145 99 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 HOXA10P31260 410 aaPredicted RBP14.15□□□□□ -0.14
RFFL-201ENST00000315249 SLC1A1P43005 524 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 ADCY2Q08462 1091 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 PTRHD1Q6GMV3 140 aaKnown RBP14.15□□□□□ -0.14
RFFL-201ENST00000315249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFFL-201ENST00000315249 AGR3Q8TD06 166 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 HTATIP2Q9BUP3 242 aa14.15□□□□□ -0.14
RFFL-201ENST00000315249 CAPN11Q9UMQ6 739 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms