RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZNF557Q8N988 423 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 VPS11Q9H270 941 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 ALS2Q96Q42 1657 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 KRT17Q04695 432 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PARP6Q2NL67 630 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 SPOPLQ6IQ16 392 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 RAB42Q8N4Z0 105 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 TRAPPC3O43617 180 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 ANXA9O76027 345 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 ATP1A1P05023 1023 aaKnown RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 KPNA1P52294 538 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 TTLL4Q14679 1199 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 TBC1D19Q8N5T2 526 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PRMT7Q9NVM4 692 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 DTNBO60941 627 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 FAM47AQ5JRC9 791 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 FAM205AQ6ZU69 1335 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 GLRA3O75311 464 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 FBXO21O94952 628 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 GYG1P46976 350 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 NAPEPLDQ6IQ20 393 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 TTI2Q6NXR4 508 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PATL1Q86TB9 770 aaKnown RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 TBC1D10CQ8IV04 446 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 UBA2Q9UBT2 640 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 MINPP1Q9UNW1 487 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 NEU2Q9Y3R4 380 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 HACD1B0YJ81 288 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 TOM1L1O75674 476 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 SCTRP47872 440 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 NDUFA5Q16718 116 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 DCAF4L1Q3SXM0 396 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 USP17L2Q6R6M4 530 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 NCLNQ969V3 563 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PCDHA6Q9UN73 950 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PCDHA8Q9Y5H6 950 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PCM1Q15154 2024 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 NQO1P15559 274 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 EEF1B2P24534 225 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MAPK1P28482 360 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 RTP1P59025 263 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 TIMM50Q3ZCQ8 353 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 IRGCQ6NXR0 463 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF34Q8IZ26 560 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 EIF2AK1Q9BQI3 630 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 KRCC1Q9NPI7 259 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 KCNK4Q9NYG8 393 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 HSD17B3P37058 310 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PEX19P40855 299 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 CEBPAP49715 358 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 FAM83EQ2M2I3 478 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 NSMFQ6X4W1 530 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 TMPRSS6Q8IU80 811 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 RNF169Q8NCN4 708 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PHC3Q8NDX5 983 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MMS19Q96T76 1030 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 LXNQ9BS40 222 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MTMR4Q9NYA4 1195 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 CDYLQ9Y232 598 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 SHOX2O60902 331 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 OSCP1Q8WVF1 389 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MTMR12Q9C0I1 747 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 EFCAB1Q9HAE3 211 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 GFPT1Q06210 699 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 EFHC1Q5JVL4 640 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 LRRC49Q8IUZ0 686 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 SLC35G2Q8TBE7 412 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 NSUN4Q96CB9 384 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 CBFA2T3O75081 653 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 CYP2C18P33260 490 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MARSP56192 900 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 TROAPQ12815 778 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 BSNDQ8WZ55 320 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 GPRASP2Q96D09 838 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PIGSQ96S52 555 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PPP2R3BQ9Y5P8 575 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 DOCK2Q92608 1830 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 KRT20P35900 424 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 POU5F1Q01860 360 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PPHLN1Q8NEY8 458 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 INTS2Q9H0H0 1204 aaKnown RBP9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MAGEE1Q9HCI5 957 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 GDAQ9Y2T3 454 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PXDNQ92626 1479 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 ZBTB22O15209 634 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 BIRC5O15392 142 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 HUS1O60921 280 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 CHN1P15882 459 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 PCSK1P29120 753 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 HTR7P34969 479 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 ARSEP51690 589 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 GTF2IP78347 998 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 RBP5P82980 135 aa9.22□□□□□ -0.93
COL6A5-202ENST00000312481 MSLNQ13421 630 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms