RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FEZF2Q8TBJ5 459 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 SNF8Q96H20 258 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 NIFKQ9BYG3 293 aaKnown RBP12.25□□□□□ -0.45
PTPN2-201ENST00000309660 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 MEFVO15553 781 aaPredicted RBP12.25□□□□□ -0.45
PTPN2-201ENST00000309660 ZSCAN5DPP0CG00 497 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 Q3C1V9 767 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 BRSK2Q8IWQ3 736 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
PTPN2-201ENST00000309660 PDGFCQ9NRA1 345 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 POLIQ9UNA4 740 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 STYXL1Q9Y6J8 313 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 SCINQ9Y6U3 715 aa12.25□□□□□ -0.45
PTPN2-201ENST00000309660 PIK3R2O00459 728 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 HGSO14964 777 aaPredicted RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 MSCO60682 206 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 MAFO75444 373 aaPredicted RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 TXNP10599 105 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 WDR72Q3MJ13 1102 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 FAM182AQ5T1J6 154 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 C6orf118Q5T5N4 469 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 EEF1DP3Q658K8 133 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 ATL2Q8NHH9 583 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 IPO4Q8TEX9 1081 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 GRK7Q8WTQ7 553 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 RUNDC3BQ96NL0 473 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 XPO6Q96QU8 1125 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 ZWILCHQ9H900 591 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 IVNS1ABPQ9Y6Y0 642 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 SSC5DA1L4H1 1573 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 DOCK1Q14185 1865 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 CXCL8P10145 99 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 CREB1P16220 341 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 CLDN10P78369 228 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 IZUMO3Q5VZ72 239 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 TXNRD3NBQ6F5E7 133 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 TRIM72Q6ZMU5 477 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 CCDC121Q6ZUS5 278 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 ERICH1Q86X53 443 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 CACNA2D3Q8IZS8 1091 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 MAIP1Q8WWC4 291 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 C10orf88Q9H8K7 445 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 OGTO15294 1046 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 ASS1P00966 412 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 ETS1P14921 441 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 NFX1Q12986 1120 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 TARBP2Q15633 366 aaKnown RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 GKAP1Q5VSY0 366 aaPredicted RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 EFCAB12Q6NXP0 572 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 MFSD7Q6UXD7 560 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 NIF3L1Q9GZT8 377 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 SAE1Q9UBE0 346 aaPredicted RBP12.24□□□□□ -0.45
PTPN2-201ENST00000309660 TJP2Q9UDY2 1190 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 AGTPBP1Q9UPW5 1226 aa12.24□□□□□ -0.45
PTPN2-201ENST00000309660 POLR2AP24928 1970 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 TNNC2P02585 160 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 EFNA5P52803 228 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 P3H1Q32P28 736 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 IER5Q5VY09 327 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 TFAP2BQ92481 460 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ARHGEF2Q92974 986 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 TLCD1Q96CP7 247 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ACO2Q99798 780 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ADGRA2Q96PE1 1338 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 GOLGA8MH3BSY2 632 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 IREB2P48200 963 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 AUHQ13825 339 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 WDR49Q8IV35 697 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 EMC1Q8N766 993 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 GLIS1Q8NBF1 620 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 MMP19Q99542 508 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 GPR20Q99678 358 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 TMEM134Q9H6X4 195 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 CNOT10Q9H9A5 744 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 DNPEPQ9ULA0 475 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 PIGRP01833 764 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ITIH2P19823 946 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 SH3D19Q5HYK7 790 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 ZPBP2Q6X784 338 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 PPP1R13LQ8WUF5 828 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 CHMP6Q96FZ7 201 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
PTPN2-201ENST00000309660 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms