RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 HPDLQ96IR7 371 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 NAP1L3Q99457 506 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-201ENST00000309469 EIF2AQ9BY44 585 aaKnown RBP22.64■■□□□ 1.21
ATG4D-201ENST00000309469 SDCBP2Q9H190 292 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 SNTG2Q9NY99 539 aa22.64■■□□□ 1.21
ATG4D-201ENST00000309469 CCDC66A2RUB6 948 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 GLI1P08151 1106 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 AXLP30530 894 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 CTNNA1P35221 906 aaKnown RBP22.63■■□□□ 1.21
ATG4D-201ENST00000309469 GUCY2FP51841 1108 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 GJA9P57773 515 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 SNX17Q15036 470 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 LLGL2Q6P1M3 1020 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 CPNE8Q86YQ8 564 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 NME8Q8N427 588 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 GPBP1L1Q9HC44 474 aaPredicted RBP22.63■■□□□ 1.21
ATG4D-201ENST00000309469 PCDHGC3Q9UN70 934 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 PCDHA3Q9Y5H8 950 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 ITGA4P13612 1032 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 P4HA1P13674 534 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 MMP8P22894 467 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 TNFRSF8P28908 595 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 FLT3LGP49771 235 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 IFT20Q8IY31 132 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 TMEM35BQ8NCS4 154 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 TMEM40Q8WWA1 233 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 TRIM7Q9C029 511 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 ZNF518BQ9C0D4 1074 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 SMYD3Q9H7B4 428 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 CYP3A43Q9HB55 503 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 MRPL47Q9HD33 250 aaKnown RBP22.63■■□□□ 1.21
ATG4D-201ENST00000309469 DERAQ9Y315 318 aa22.63■■□□□ 1.21
ATG4D-201ENST00000309469 MYO1FO00160 1098 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 RAD51CO43502 376 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 HEXIM1O94992 359 aaKnown RBP22.62■■□□□ 1.21
ATG4D-201ENST00000309469 STAU1O95793 577 aaKnown RBP22.62■■□□□ 1.21
ATG4D-201ENST00000309469 MAMLD1Q13495 774 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 CASP8Q14790 479 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 GNASQ5JWF2 1037 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 PLEKHA7Q6IQ23 1121 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 GSPT2Q8IYD1 628 aaKnown RBP22.62■■□□□ 1.21
ATG4D-201ENST00000309469 MTG1Q9BT17 334 aaPredicted RBP22.62■■□□□ 1.21
ATG4D-201ENST00000309469 GDF3Q9NR23 364 aa22.62■■□□□ 1.21
ATG4D-201ENST00000309469 MGAMO43451 1857 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 PAEPP09466 180 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 CRYBB1P53674 252 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 YARSP54577 528 aaKnown RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 RAD23BP54727 409 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 SNX27Q96L92 541 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 SCINQ9Y6U3 715 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 KIF3CO14782 793 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 SART1O43290 800 aaKnown RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 CDH5P33151 784 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 SLC1A1P43005 524 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 GUCY2DQ02846 1103 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 WDTC1Q8N5D0 677 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 C1orf131Q8NDD1 294 aaKnown RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 WHAMMQ8TF30 809 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 AENQ8WTP8 325 aaKnown RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 DDX47Q9H0S4 455 aaKnown RBP22.61■■□□□ 1.21
ATG4D-201ENST00000309469 CXCL16Q9H2A7 254 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 EPB41L5Q9HCM4 733 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 PARVAQ9NVD7 372 aa22.61■■□□□ 1.21
ATG4D-201ENST00000309469 MED7O43513 233 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 CILPO75339 1184 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 CD19P15391 556 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 AADACL2Q6P093 401 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 ZMAT2Q96NC0 199 aaKnown RBP22.6■■□□□ 1.21
ATG4D-201ENST00000309469 TRIM6Q9C030 488 aaPredicted RBP22.6■■□□□ 1.21
ATG4D-201ENST00000309469 PLEKHA4Q9H4M7 779 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 SLITRK6Q9H5Y7 841 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 PIN4Q9Y237 131 aaKnown RBP22.6■■□□□ 1.21
ATG4D-201ENST00000309469 NR2E1Q9Y466 385 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 HES2Q9Y543 173 aa22.6■■□□□ 1.21
ATG4D-201ENST00000309469 CALB1P05937 261 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 PYGMP11217 842 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 RWDD2BP57060 319 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 PRKCZQ05513 592 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 ZBTB6Q15916 424 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 UPF3AQ9H1J1 476 aaKnown RBP22.59■■□□□ 1.21
ATG4D-201ENST00000309469 CEP83Q9Y592 693 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 PROSCO94903 275 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 PGK1P00558 417 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 TNNT3P45378 269 aaPredicted RBP22.59■■□□□ 1.21
ATG4D-201ENST00000309469 SEL1L2Q5TEA6 688 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 TAF2Q6P1X5 1199 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 DENND1BQ6P3S1 775 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 ALKAL1Q6UXT8 129 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 SLC4A11Q8NBS3 891 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 TMEM176AQ96HP8 235 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 TWNKQ96RR1 684 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 ELOVL4Q9GZR5 314 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 LHX5Q9H2C1 402 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 NXF3Q9H4D5 531 aaKnown RBP22.59■■□□□ 1.21
ATG4D-201ENST00000309469 SPC25Q9HBM1 224 aa22.59■■□□□ 1.21
ATG4D-201ENST00000309469 A0A0U1RQG5 324 aaPredicted RBP22.58■■□□□ 1.21
ATG4D-201ENST00000309469 ZSCAN5CA6NGD5 496 aaPredicted RBP22.58■■□□□ 1.21
ATG4D-201ENST00000309469 SEPT4O43236 478 aa22.58■■□□□ 1.21
ATG4D-201ENST00000309469 CXCL17Q6UXB2 119 aa22.58■■□□□ 1.21
ATG4D-201ENST00000309469 CCDC26Q8TAB7 109 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms