RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HAUS5O94927 633 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 EMC1Q8N766 993 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 COPS5Q92905 334 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 SLC13A1Q9BZW2 595 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 KRT1P04264 644 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 RARAP10276 462 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 ADSSP30520 456 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 GNA15P30679 374 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 TNFSF9P41273 254 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 GSDMBQ8TAX9 411 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 NSUN6Q8TEA1 469 aaKnown RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 PYROXD1Q8WU10 500 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 SYN2Q92777 582 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-201ENST00000309428 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
RETREG3-201ENST00000309428 RIPK2O43353 540 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 MT-ND3P03897 115 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 HSPA6P17066 643 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 CDH8P55286 799 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 PDE1CQ14123 709 aaPredicted RBP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 P3H1Q32P28 736 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 LRRC57Q8N9N7 239 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 HSPH1Q92598 858 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 CARD9Q9H257 536 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 ADGRA3Q8IWK6 1321 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 VWA5AO00534 786 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 CAPN9O14815 690 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 ENO1P06733 434 aaKnown RBP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 TMEM191BP0C7N4 346 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 NRLP54845 237 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 PTENP60484 403 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 AMHR2Q16671 573 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 SLC25A41Q8N5S1 370 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 GGPS1O95749 300 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 INHBAP08476 426 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 NCALDP61601 193 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 TMED1Q13445 227 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 TTC27Q6P3X3 843 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 USP37Q86T82 979 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 CD302Q8IX05 232 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 MREGQ8N565 214 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 ZNF280CQ8ND82 737 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 SCFD2Q8WU76 684 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 CFAP57Q96MR6 1250 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 RIT2Q99578 217 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 MOV10L1Q9BXT6 1211 aaKnown RBP13.36□□□□□ -0.27
RETREG3-201ENST00000309428 PHTF1Q9UMS5 762 aa13.36□□□□□ -0.27
RETREG3-201ENST00000309428 DCTN3O75935 186 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 PSAPP07602 524 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 CLCN3P51790 818 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 MTDHQ86UE4 582 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 SLC13A5Q86YT5 568 aaPredicted RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 C1orf131Q8NDD1 294 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 AGR3Q8TD06 166 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 TRPM4Q8TD43 1214 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 MCEEQ96PE7 176 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 RPS6KC1Q96S38 1066 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 FAM47DPA6NHR8 397 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 CDH16O75309 829 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 SAT1P21673 171 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 GCLCP48506 637 aaPredicted RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 AUHQ13825 339 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 EMC2Q15006 297 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 C1orf146Q5VVC0 180 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 TTC8Q8TAM2 541 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 CLEC4DQ8WXI8 215 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 SNF8Q96H20 258 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 ZNF302Q9NR11 478 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.35□□□□□ -0.274e-8■□□□□ 10.3
RETREG3-201ENST00000309428 SEL1LQ9UBV2 794 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 WDR46O15213 610 aaKnown RBP13.35□□□□□ -0.27
RETREG3-201ENST00000309428 TOM1L1O75674 476 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 WNT7BP56706 349 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 BTKQ06187 659 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 XRCC4Q13426 336 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 CNGA2Q16280 664 aa13.35□□□□□ -0.27
RETREG3-201ENST00000309428 LVRNQ6Q4G3 990 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms