RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 IKZF4Q9H2S9 585 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 KCTD10Q9H3F6 313 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 NXF3Q9H4D5 531 aaKnown RBP8.88□□□□□ -0.99
CHD6-201ENST00000309279 MAN1B1Q9UKM7 699 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 ZNF232Q9UNY5 417 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 GIT1Q9Y2X7 761 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 PCDHA11Q9Y5I1 949 aa8.88□□□□□ -0.99
CHD6-201ENST00000309279 TISP43B9A030 160 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 PDXKO00764 312 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 KIAA0391O15091 583 aaKnown RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 OGTO15294 1046 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 TLL1O43897 1013 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 FGFR1P11362 822 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ITGA4P13612 1032 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 SOX11P35716 441 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 GRM5P41594 1212 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 PRCPP42785 496 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 HTR3AP46098 478 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 RABGGTBP53611 331 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 UBASH3AP57075 661 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 SLMAPQ14BN4 828 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 KLHL40Q2TBA0 621 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 XKR4Q5GH76 650 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 IL31Q6EBC2 164 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 FAM117BQ6P1L5 589 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ALKAL1Q6UXT8 129 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ZBTB33Q86T24 672 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 C12orf56Q8IXR9 622 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 LPPQ93052 612 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 CASD1Q96PB1 797 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 YME1L1Q96TA2 773 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 HERPUD2Q9BSE4 406 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 TMEM117Q9H0C3 514 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 RSAD1Q9HA92 442 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ANKFY1Q9P2R3 1169 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 TRAF3IP3Q9Y228 551 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 TDRD15B5MCY1 1934 aaKnown RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 MYO9BQ13459 2157 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ARL5CA6NH57 179 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 INMTO95050 263 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ADRB2P07550 413 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 CLTAP09496 248 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 LINC00271P0C7V0 271 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 AKAP5P24588 427 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 PBX2P40425 430 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 AFF1P51825 1210 aaKnown RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 NEK3P51956 506 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 DAB2P98082 770 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 PDE1CQ14123 709 aaPredicted RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 RAB30Q15771 203 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 NFIL3Q16649 462 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ZCWPW2Q504Y3 356 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 CENPPQ6IPU0 288 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 PLBD1Q6P4A8 553 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 MZT2AQ6P582 158 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 GLB1LQ6UWU2 654 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 CRELD2Q6UXH1 353 aaPredicted RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 ZNF354CQ86Y25 554 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 NELFCDQ8IXH7 590 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 TMEM192Q8IY95 271 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 SMYD4Q8IYR2 804 aaPredicted RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 CMTR2Q8IYT2 770 aaKnown RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 ADSSL1Q8N142 457 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 KLHL23Q8NBE8 558 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 RNF169Q8NCN4 708 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 GOLGA5Q8TBA6 731 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 POMGNT1Q8WZA1 660 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 FBXL18Q96ME1 805 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ACAP3Q96P50 834 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 CBWD1Q9BRT8 395 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 MSTO1Q9BUK6 570 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 AGPAT3Q9NRZ7 376 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ZIM2Q9NZV7 527 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 SIRPGQ9P1W8 387 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 KANSL3Q9P2N6 904 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 MSRAQ9UJ68 235 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 CPSF3Q9UKF6 684 aaKnown RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 AGO2Q9UKV8 859 aaKnown RBP8.87□□□□□ -0.99
CHD6-201ENST00000309279 MAPK8IP1Q9UQF2 711 aa8.87□□□□□ -0.99
CHD6-201ENST00000309279 ANK1P16157 1881 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 PDCD11Q14690 1871 aaKnown RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 LCHNA4D1U4 455 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 TBKBP1A7MCY6 615 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 MEFVO15553 781 aaPredicted RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 RECQL4O94761 1208 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 MYOGP15173 224 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 PPP1R2P41236 205 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 STT3AP46977 705 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 GATMP50440 423 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 SH3BGRP55822 239 aaPredicted RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 COX10Q12887 443 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 SLC10A6Q3KNW5 377 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 ZC3H12BQ5HYM0 836 aaKnown RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 NOMO2Q5JPE7 1267 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 HABP4Q5JVS0 413 aaKnown RBP8.86□□□□□ -0.99
CHD6-201ENST00000309279 CCDC183Q5T5S1 534 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 ISM2Q6H9L7 571 aa8.86□□□□□ -0.99
CHD6-201ENST00000309279 ARMCX5Q6P1M9 558 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms