RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 SH2D3AQ9BRG2 576 aa11.03□□□□□ -0.64
MSRB3-201ENST00000308259 ARHGEF3Q9NR81 526 aa11.03□□□□□ -0.64
MSRB3-201ENST00000308259 CLPTM1O96005 669 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 AGTP01019 485 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 S100A1P23297 94 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 CYP2J2P51589 502 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 AP2B1P63010 937 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 AGBL3Q8NEM8 1001 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 DEPTORQ8TB45 409 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 MAML3Q96JK9 1138 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 KIAA1683Q9H0B3 1180 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 KLHL25Q9H0H3 589 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 DENND2DQ9H6A0 471 aaPredicted RBP11.02□□□□□ -0.64
MSRB3-201ENST00000308259 CTNNAL1Q9UBT7 734 aa11.02□□□□□ -0.64
MSRB3-201ENST00000308259 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 ZBED4O75132 1171 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 FGGP02679 453 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 OCM2P0CE71 109 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 OCMP0CE72 109 aaPredicted RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 PPP2R5CQ13362 524 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 UAP1Q16222 522 aaPredicted RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 WASHC2DQ5SRD0 308 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 TPH2Q8IWU9 490 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 SYT2Q8N9I0 419 aaPredicted RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 DQX1Q8TE96 717 aaKnown RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 TIPINQ9BVW5 301 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 OLFML3Q9NRN5 406 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 DNM3Q9UQ16 869 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 NAV1Q8NEY1 1877 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 EML1O00423 815 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 NR3C1P04150 777 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 DR1Q01658 176 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 KNOP1Q1ED39 458 aaKnown RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 DAB2IPQ5VWQ8 1189 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 SLFN13Q68D06 897 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 SATL1Q86VE3 508 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 MREGQ8N565 214 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 CSRNP1Q96S65 589 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
MSRB3-201ENST00000308259 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 DNAJC18Q9H819 358 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 UBN1Q9NPG3 1134 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 CSPG5O95196 566 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 CAPN1P07384 714 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 GSTT2P0CG29 244 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 GSTT2BP0CG30 244 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 SPATA31C1P0DKV0 1188 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 INHBCP55103 352 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 KRT72Q14CN4 511 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 TMED2Q15363 201 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 GRIP2Q9C0E4 1043 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 Q9H521 79 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 AIPL1Q9NZN9 384 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 HEY1Q9Y5J3 304 aa11.02□□□□□ -0.65
MSRB3-201ENST00000308259 DDTLA6NHG4 134 aaPredicted RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 DDX3XO00571 662 aaKnown RBP eCLIP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 MEIS2O14770 477 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 THAP12O43422 761 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 KRT10P13645 584 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 ECHS1P30084 290 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 KHDC1Q4VXA5 237 aaKnown RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 OR52E8Q6IFG1 317 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 TPCN2Q8NHX9 752 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 THAP11Q96EK4 314 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 OXCT2Q9BYC2 517 aaPredicted RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 PAIP1Q9H074 479 aaKnown RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 HACL1Q9UJ83 578 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 GAKO14976 1311 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 ABCB11O95342 1321 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 IGSF9BQ9UPX0 1349 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 KDM3AQ9Y4C1 1321 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 POLGP54098 1239 aaPredicted RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 MDH1BQ5I0G3 518 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 SLC26A7Q8TE54 656 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 GLG1Q92896 1179 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 CCDC124Q96CT7 223 aaKnown RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 IL1RAPL1Q9NZN1 696 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 CLRN2A0PK11 232 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 O00370 1275 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
MSRB3-201ENST00000308259 UBAP2Q5T6F2 1119 aaKnown RBP11.01□□□□□ -0.65
MSRB3-201ENST00000308259 IGKV6D-41A0A0C4DH26 115 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 DDX39AO00148 427 aaKnown RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 USP11P51784 963 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 GALCP54803 685 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 ABCB5Q2M3G0 1257 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 RSBN1LQ6PCB5 846 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 ZBTB46Q86UZ6 589 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 CLIP3Q96DZ5 547 aa11□□□□□ -0.65
MSRB3-201ENST00000308259 MRPL1Q9BYD6 325 aaKnown RBP11□□□□□ -0.65
MSRB3-201ENST00000308259 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms