RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GRIK1P39086 918 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 MDH1P40925 334 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 RAB25P57735 213 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TGM3Q08188 693 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TMEM259Q4ZIN3 620 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 LYPLAL1Q5VWZ2 237 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CMTR1Q8N1G2 835 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 DEPDC1BQ8WUY9 529 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TP53INP1Q96A56 240 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NARFQ9UHQ1 456 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 SERPINB8P50452 374 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 INHBEP58166 350 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 WLSQ5T9L3 541 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PDZD8Q8NEN9 1154 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 MAGEB18Q96M61 343 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TRAPPC9Q96Q05 1148 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 KLHL4Q9C0H6 718 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 BAZ2AQ9UIF9 1905 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 GSAPA4D1B5 854 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 C3orf70A6NLC5 250 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 MYO1CO00159 1063 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 STX11O75558 287 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RALAP11233 206 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PMS2P54278 862 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 KDM7AQ6ZMT4 941 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CHST13Q8NET6 341 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FANCFQ9NPI8 374 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 KBTBD4Q9NVX7 518 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RCOR3Q9P2K3 495 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 DSG1Q02413 1049 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SF3A3Q12874 501 aaKnown RBP eCLIP4.2□□□□□ -1.74
USH2A-201ENST00000307340 NFIL3Q16649 462 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TBCKQ8TEA7 893 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CEP19Q96LK0 163 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 LSM14BQ9BX40 385 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 PARD6BQ9BYG5 372 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.2□□□□□ -1.74
USH2A-201ENST00000307340 FAM25AB3EWG3 89 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FAM25CB3EWG5 89 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FAM25GB3EWG6 89 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 IRF6O14896 467 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 VHLP40337 213 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CAPZA1P52907 286 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 GPSM2P81274 684 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RFTN2Q52LD8 501 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 MEI1Q5TIA1 1274 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 S100ZQ8WXG8 99 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 REPS1Q96D71 796 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CYFIP2Q96F07 1278 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 AAASQ9NRG9 546 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 BTG4Q9NY30 223 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZSWIM5Q9P217 1185 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NYAP2Q9P242 653 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ADCY6O43306 1168 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RUNX1T1Q06455 604 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 GABPAQ06546 454 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CDK18Q07002 472 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CCDC92Q53HC0 331 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 SVOPQ8N4V2 548 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CCNB1IP1Q9NPC3 277 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TNFAIP8O95379 198 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NR3C1P04150 777 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 NR4A1P22736 598 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TECP42680 631 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CPT1AP50416 773 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RESTQ13127 1097 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PRKG1Q13976 671 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZPBP2Q6X784 338 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZNF354CQ86Y25 554 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZNF280CQ8ND82 737 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 FNIP2Q9P278 1114 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 MAGEA13PA6NCF6 341 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 Q4G0T1 1027 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 HAVCR2Q8TDQ0 301 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PRMT6Q96LA8 375 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZNF451Q9Y4E5 1061 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PXDNQ92626 1479 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 GUCY1B2O75343 617 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 EGFRP00533 1210 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 EHHADHQ08426 723 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RAD51AP2Q09MP3 1159 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PLS1Q14651 629 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 INAQ16352 499 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PHF21AQ96BD5 680 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ANO3Q9BYT9 981 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SCN3BQ9NY72 215 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZFP69BQ9UJL9 534 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 TNPO3Q9Y5L0 923 aaKnown RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 NAV1Q8NEY1 1877 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 A0A088AWK7 358 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 PLK4O00444 970 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 DYRK3O43781 588 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZNF10P21506 573 aaPredicted RBP4.2□□□□□ -1.74
USH2A-201ENST00000307340 DCLK2Q8N568 766 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ENKURQ8TC29 256 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 ZNF653Q96CK0 615 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 CEP170P1Q96L14 293 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 RBBP8Q99708 897 aa4.2□□□□□ -1.74
USH2A-201ENST00000307340 SMARCAD1Q9H4L7 1026 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms