RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PDK1Q15118 436 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 TBCCQ15814 346 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 RBBP7Q16576 425 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 SH2D3CQ8N5H7 860 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 SGSM3Q96HU1 749 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 XAB2Q9HCS7 855 aaKnown RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 TRIM65Q6PJ69 517 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 DCP1BQ8IZD4 617 aaKnown RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 EFHBQ8N7U6 833 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 PPP1R2P1Q96PQ5 205 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.71■□□□□ 0.27
USP42-201ENST00000306177 FAM205AQ6ZU69 1335 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 CST8O60676 142 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 DNAJC6O75061 913 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 BRD2P25440 801 aaKnown RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 CPT1AP50416 773 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 EPC2Q52LR7 807 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 ACAD10Q6JQN1 1059 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 CYP4F11Q9HBI6 524 aa16.71■□□□□ 0.27
USP42-201ENST00000306177 SPATS2LQ9NUQ6 558 aaKnown RBP16.71■□□□□ 0.27
USP42-201ENST00000306177 RGL2O15211 777 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 MYO1DO94832 1006 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 NPTXRO95502 500 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 PON1P27169 355 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 BACE1P56817 501 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 Q4G0T1 1027 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 SZRD1Q7Z422 152 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 UBA3Q8TBC4 463 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 ROPN1BQ9BZX4 212 aaPredicted RBP16.7■□□□□ 0.26
USP42-201ENST00000306177 ROPN1Q9HAT0 212 aaPredicted RBP16.7■□□□□ 0.26
USP42-201ENST00000306177 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
USP42-201ENST00000306177 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
USP42-201ENST00000306177 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 GNL1P36915 607 aaPredicted RBP16.7■□□□□ 0.26
USP42-201ENST00000306177 PKN1Q16512 942 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 RMDN2Q96LZ7 410 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 CARD9Q9H257 536 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 METTL5Q9NRN9 209 aaKnown RBP16.7■□□□□ 0.26
USP42-201ENST00000306177 EHD2Q9NZN4 543 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 AIPL1Q9NZN9 384 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 LAMB3Q13751 1172 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 TPCN2Q8NHX9 752 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 AARSP49588 968 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP42-201ENST00000306177 HUNKP57058 714 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 KCNA1Q09470 495 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 TRADDQ15628 312 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 USP33Q8TEY7 942 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 TSPAN17Q96FV3 270 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 NAGPAQ9UK23 515 aa16.7■□□□□ 0.26
USP42-201ENST00000306177 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 ITGB3P05106 788 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 MCF2P10911 925 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 GFAPP14136 432 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 MAGEA4P43358 317 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 POLE2P56282 527 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 CXCL9Q07325 125 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 SLC7A14Q8TBB6 771 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 AGR3Q8TD06 166 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 DBR1Q9UK59 544 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 FAM47DPA6NHR8 397 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 RBP3P10745 1247 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 KCNA2P16389 499 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 TAF6P49848 677 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 NLRP11P59045 1033 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 GIT2Q14161 759 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 E2F4Q16254 413 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 C4orf22Q6V702 233 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 CHMP2BQ9UQN3 213 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 ARP10275 920 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 CARSP49589 748 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 MMP14P50281 582 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 ITGA8P53708 1063 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 DCAF6Q58WW2 860 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 RBM43Q6ZSC3 357 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 RPAINQ86UA6 219 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 PTPRN2Q92932 1015 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 TSSK1BQ9BXA7 367 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 CELF4Q9BZC1 486 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 CATSPERBQ9H7T0 1116 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 RNF103-CHMP3A0A140T963 221 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 OGTO15294 1046 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 COILP38432 576 aaPredicted RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 NAMPTP43490 491 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 FIGNQ5HY92 759 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 NOA1Q8NC60 698 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 C1orf131Q8NDD1 294 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 PABPC5Q96DU9 382 aaKnown RBP16.69■□□□□ 0.26
USP42-201ENST00000306177 FAM118BQ9BPY3 351 aa16.69■□□□□ 0.26
USP42-201ENST00000306177 DYRK4Q9NR20 520 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms