RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 KRT35Q92764 455 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 ULK4Q96C45 1275 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 JMJD4Q9H9V9 463 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 LZTS1Q9Y250 596 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 PSMD3O43242 534 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 NME3Q13232 169 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
COL3A1-201ENST00000304636 LRRC8BQ6P9F7 803 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 FAM111AQ96PZ2 611 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 HERC5Q9UII4 1024 aaKnown RBP13.45□□□□□ -0.26
COL3A1-201ENST00000304636 A8MXQ7 604 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 RBP3P10745 1247 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 GNAT1P11488 350 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 KIAA2013Q8IYS2 634 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 PPHLN1Q8NEY8 458 aaKnown RBP13.45□□□□□ -0.26
COL3A1-201ENST00000304636 ZNF507Q8TCN5 953 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 PAPOLBQ9NRJ5 636 aaKnown RBP13.45□□□□□ -0.26
COL3A1-201ENST00000304636 AGPAT3Q9NRZ7 376 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 NSMCE4AQ9NXX6 385 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 SEPT3Q9UH03 358 aa13.45□□□□□ -0.26
COL3A1-201ENST00000304636 ZC3H13Q5T200 1668 aaKnown RBP13.45□□□□□ -0.26
COL3A1-201ENST00000304636 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 WDR72Q3MJ13 1102 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ZNF571Q7Z3V5 609 aaPredicted RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ABI1Q8IZP0 508 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 LOC100653049A0A140TA62 436 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 KRT34O76011 436 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 HLA-DRAP01903 254 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 KRT16P08779 473 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ADORA2BP29275 332 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 HADHAP40939 763 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ACOT2P49753 483 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 NAIF1Q69YI7 327 aaPredicted RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 TMC3Q7Z5M5 1100 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ADCK1Q86TW2 530 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 OR6P1Q8NGX9 317 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ATP8B4Q8TF62 1192 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 TASP1Q9H6P5 420 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 C15orf41Q9Y2V0 281 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 SLC37A4O43826 429 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 ATICP31939 592 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 TMED10P49755 219 aaKnown RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 HDAC7Q8WUI4 952 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 SNX19Q92543 992 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 PALMDQ9NP74 551 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 TMEM247A6NEH6 219 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 FOXN3O00409 490 aaPredicted RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 GZMAP12544 262 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 SPDYCQ5MJ68 293 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 CYGBQ8WWM9 190 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 SLC13A4Q9UKG4 626 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 POLBP06746 335 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 DAB2P98082 770 aa13.44□□□□□ -0.26
COL3A1-201ENST00000304636 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 EIF1ADQ8N9N8 165 aaKnown RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 JPH1Q9HDC5 661 aaPredicted RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
COL3A1-201ENST00000304636 SRRM3A6NNA2 597 aaPredicted RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 STIP1P31948 543 aaKnown RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 MEA1Q16626 185 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 Q3C1V9 767 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 CREG2Q8IUH2 290 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 THEM5Q8N1Q8 247 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 TSPAN17Q96FV3 270 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 RIT2Q99578 217 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 SLC24A2Q9UI40 661 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 C3orf70A6NLC5 250 aaPredicted RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 XPO1O14980 1071 aaKnown RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 PJA2O43164 708 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 TRAPPC3O43617 180 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 STRNO43815 780 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FAM153BP0C7A2 387 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 RBBP7Q16576 425 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FAM153CQ494X1 144 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 SLC44A4Q53GD3 710 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 MTDHQ86UE4 582 aaKnown RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FAM49AQ9H0Q0 323 aaPredicted RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 HACD3Q9P035 362 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FAM153AQ9UHL3 310 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 DAGLAQ9Y4D2 1042 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 E5RI56 91 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 RIPK2O43353 540 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 TBC1D4O60343 1298 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 SYF2O95926 243 aaKnown RBP13.43□□□□□ -0.26
COL3A1-201ENST00000304636 ATP6V1B1P15313 513 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 TNFRSF8P28908 595 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 WLSQ5T9L3 541 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 FAM71DQ8N9W8 422 aa13.43□□□□□ -0.26
COL3A1-201ENST00000304636 TLR10Q9BXR5 811 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms