RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 IDEP14735 1019 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 GARTP22102 1010 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 PNPLA4P41247 253 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 ALDH1A3P47895 512 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 TAF6P49848 677 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 SMARCB1Q12824 385 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 STXBP4Q6ZWJ1 553 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 METTL23Q86XA0 190 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 NKD2Q969F2 451 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 ZNF560Q96MR9 790 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 NELL2Q99435 816 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 TNMDQ9H2S6 317 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 CUEDC2Q9H467 287 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 TMEM206Q9H813 350 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 DPP3Q9NY33 737 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 TCHHQ07283 1943 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 SCN1AP35498 2009 aa18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 PTPRZ1P23471 2315 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC1-201ENST00000303731 PPEF2O14830 753 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 KIAA0391O15091 583 aaKnown RBP18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 SPTLC2O15270 562 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 ADSSP30520 456 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 SNW1Q13573 536 aaKnown RBP18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 SV2CQ496J9 727 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 CENPPQ6IPU0 288 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 ITIH5Q86UX2 942 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 CCDC65Q8IXS2 484 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 SYCP3Q8IZU3 236 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 THEM5Q8N1Q8 247 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 LINC00301Q8NCQ3 95 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 ST13P5Q8NFI4 369 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 C2orf15Q8WU43 125 aaKnown RBP18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 SMARCD2Q92925 531 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 E2F7Q96AV8 911 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 TCEAL4Q96EI5 215 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 ASB16Q96NS5 453 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 SEMA4AQ9H3S1 761 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 PANK4Q9NVE7 773 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 DLGAP2Q9P1A6 1054 aa18.02■□□□□ 0.48
TRAPPC1-201ENST00000303731 VPS13AQ96RL7 3174 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 MTMR11A4FU01 709 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 TISP43B9A030 160 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 YEATS4O95619 227 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 OR4Q2P0C623 313 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 CCR2P41597 374 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 TUFMP49411 452 aaKnown RBP18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 AMPD3Q01432 767 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 DUSP4Q13115 394 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 FAM78AQ5JUQ0 283 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 TANGO2Q6ICL3 276 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 ZC3H14Q6PJT7 736 aaKnown RBP18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 CRELD2Q6UXH1 353 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 CACTINQ8WUQ7 758 aaKnown RBP18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 DEPDC1BQ8WUY9 529 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 PGLYRP2Q96PD5 576 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 BCO2Q9BYV7 579 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 MRPS17Q9Y2R5 130 aaKnown RBP18.01■□□□□ 0.47
TRAPPC1-201ENST00000303731 PRR23AA6NEV1 266 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 CYB561D2O14569 222 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 SPTLC1O15269 473 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 NCAM2O15394 837 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 VNN2O95498 520 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 DCNP07585 359 aaKnown RBP18■□□□□ 0.47
TRAPPC1-201ENST00000303731 MYL4P12829 197 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 FCARP24071 287 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 FRMD5Q7Z6J6 570 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 C1orf210Q8IVY1 113 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 HSCBQ8IWL3 235 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 BRSK2Q8IWQ3 736 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 TMEM130Q8N3G9 435 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 IRF7Q92985 503 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 PSMG2Q969U7 264 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 BORCS6Q96GS4 357 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 FAM213AQ9BRX8 229 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 TRMT61BQ9BVS5 477 aaKnown RBP18■□□□□ 0.47
TRAPPC1-201ENST00000303731 FOXQ1Q9C009 403 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 TRPV5Q9NQA5 729 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 TBC1D7Q9P0N9 293 aa18■□□□□ 0.47
TRAPPC1-201ENST00000303731 A0A087X0B3 334 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 KPNA7A9QM74 516 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 HSP90AA1P07900 732 aaKnown RBP17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 PSMC3P17980 439 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 KCNA1Q09470 495 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 VEPH1Q14D04 833 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 ZNF852Q6ZMS4 543 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 EFCAB13Q8IY85 973 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 HS6ST3Q8IZP7 471 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 PDILTQ8N807 584 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 PYM1Q9BRP8 204 aaKnown RBP17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 PLA2G2FQ9BZM2 168 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 ZCWPW1Q9H0M4 648 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 SLITRK6Q9H5Y7 841 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 BRD9Q9H8M2 597 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 MAGEF1Q9HAY2 307 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 LTB4R2Q9NPC1 389 aa17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 RBAKQ9NYW8 714 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC1-201ENST00000303731 F5P12259 2224 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms