RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PI4K2BG5E9Z4 385 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 SOX5P35711 763 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 MAGEA4P43358 317 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 GAD2Q05329 585 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 UBAP2LQ14157 1087 aaKnown RBP15.21■□□□□ 0.03
CDT1-201ENST00000301019 RASA2Q15283 850 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 EPHA7Q15375 998 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 RALGPS1Q5JS13 557 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 CROCCP2Q86T23 111 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 SLC7A5P1Q8MH63 180 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 RUSC1Q9BVN2 902 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 PCIF1Q9H4Z3 704 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 USP29Q9HBJ7 922 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 SPATA7Q9P0W8 599 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 ANKFY1Q9P2R3 1169 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 ZNF212Q9UDV6 495 aa15.21■□□□□ 0.03
CDT1-201ENST00000301019 EYA4O95677 639 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 CLPTM1O96005 669 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 PENKP01210 267 aaPredicted RBP15.21■□□□□ 0.02
CDT1-201ENST00000301019 KLRK1P26718 216 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 KPNA1P52294 538 aaPredicted RBP15.21■□□□□ 0.02
CDT1-201ENST00000301019 AP2B1P63010 937 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 ALCAMQ13740 583 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 FBXL19Q6PCT2 694 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 TRABD2AQ86V40 505 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 APLFQ8IW19 511 aaPredicted RBP15.21■□□□□ 0.02
CDT1-201ENST00000301019 SLF2Q8IX21 1173 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 ZFP28Q8NHY6 868 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 ZNF384Q8TF68 577 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 CATSPER2Q96P56 530 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 TRIM55Q9BYV6 548 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.02
CDT1-201ENST00000301019 DCP1AQ9NPI6 582 aaPredicted RBP15.21■□□□□ 0.02
CDT1-201ENST00000301019 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.02
CDT1-201ENST00000301019 E5RJQ4 531 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 M0R2N6 131 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 VCLP18206 1134 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 PPIDQ08752 370 aaKnown RBP15.2■□□□□ 0.02
CDT1-201ENST00000301019 PDIA2Q13087 525 aaKnown RBP15.2■□□□□ 0.02
CDT1-201ENST00000301019 CYLC2Q14093 348 aaPredicted RBP15.2■□□□□ 0.02
CDT1-201ENST00000301019 C6orf163Q5TEZ5 329 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 ZNF772Q68DY9 489 aaPredicted RBP15.2■□□□□ 0.02
CDT1-201ENST00000301019 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 GDPD5Q8WTR4 605 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 SNF8Q96H20 258 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 FAM111AQ96PZ2 611 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 KCTD10Q9H3F6 313 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 UBAP1Q9NZ09 502 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 PCYOX1Q9UHG3 505 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 TSC22D4Q9Y3Q8 395 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 VILLO15195 856 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 SSTR1P30872 391 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
CDT1-201ENST00000301019 PDK4Q16654 411 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 PROM2Q8N271 834 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 METTL25Q8N6Q8 603 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 SLC35C1Q96A29 364 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 TSSK1BQ9BXA7 367 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 STK32BQ9NY57 414 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 SELENONQ9NZV5 590 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 ADAMTS6Q9UKP5 1117 aa15.2■□□□□ 0.02
CDT1-201ENST00000301019 C15orf38-AP3S2A0A0A6YYH1 394 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 NR3C1P04150 777 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 NMT1P30419 496 aaKnown RBP15.19■□□□□ 0.02
CDT1-201ENST00000301019 MAPK10P53779 464 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 SLC45A4Q5BKX6 768 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 ARPINQ7Z6K5 226 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 ULK2Q8IYT8 1036 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 TAL1P17542 331 aaPredicted RBP15.19■□□□□ 0.02
CDT1-201ENST00000301019 PMLP29590 882 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 ATP1A4Q13733 1029 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 TMEM53Q6P2H8 277 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 KRT25Q7Z3Z0 450 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 PRPF39Q86UA1 669 aaKnown RBP15.19■□□□□ 0.02
CDT1-201ENST00000301019 NLRX1Q86UT6 975 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 PPP2R3CQ969Q6 453 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 LRRC27Q9C0I9 530 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 PRDM16Q9HAZ2 1276 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 NEU2Q9Y3R4 380 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 NID2Q14112 1375 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 BAZ2AQ9UIF9 1905 aaKnown RBP15.19■□□□□ 0.02
CDT1-201ENST00000301019 TMX2-CTNND1H3BSU7 103 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 ZBTB39O15060 712 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 LMNB1P20700 586 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 SLC16A2P36021 539 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 DRG2P55039 364 aaKnown RBP15.19■□□□□ 0.02
CDT1-201ENST00000301019 MYLK3Q32MK0 819 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 TMEM214Q6NUQ4 689 aaKnown RBP15.19■□□□□ 0.02
CDT1-201ENST00000301019 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 LINC00116Q8NCU8 138 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 TMEM109Q9BVC6 243 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 MAGEF1Q9HAY2 307 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 ZBTB21Q9ULJ3 1066 aa15.19■□□□□ 0.02
CDT1-201ENST00000301019 NHSQ6T4R5 1651 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms