RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 TRAPPC9Q96Q05 1148 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 EFCAB1Q9HAE3 211 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 MYH9P35579 1960 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
GCN1-201ENST00000300648 ASNA1O43681 348 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 CLPTM1O96005 669 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 PRLRP16471 622 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 PPIL6Q8IXY8 311 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 AMACRQ9UHK6 382 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 POTECB2RU33 542 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 NEMP1O14524 444 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 KCNN4O15554 427 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 TRAPPC3O43617 180 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 KIAA0825Q8IV33 1275 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 C19orf18Q8NEA5 215 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 NDFIP2Q9NV92 336 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 IL18RAPO95256 599 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 SRGNP10124 158 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 IYDQ6PHW0 289 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 SVOPQ8N4V2 548 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 NSUN6Q8TEA1 469 aaKnown RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 DTNAQ9Y4J8 743 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 ABCA9Q8IUA7 1624 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 RHOBTB1O94844 696 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 SEC24DO94855 1032 aaPredicted RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 APRTP07741 180 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 ENO3P13929 434 aaPredicted RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 CCT8P50990 548 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 GYS2P54840 703 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 FGD2Q7Z6J4 655 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 ARL8AQ96BM9 186 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 RMND5AQ9H871 391 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 HOXD10P28358 340 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 SNX17Q15036 470 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 C7orf25Q9BPX7 421 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 GOLPH3Q9H4A6 298 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 RBAKQ9NYW8 714 aaPredicted RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 FAM153AQ9UHL3 310 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 MAGED2Q9UNF1 606 aaPredicted RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 CDK8P49336 464 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 RAD23AP54725 363 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 PDCD6IPQ8WUM4 868 aaKnown RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 DYRK4Q9NR20 520 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 ESYT3A0FGR9 886 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 TIMM44O43615 452 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 TNFAIP8O95379 198 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 ADORA1P30542 326 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 FAM25AB3EWG3 89 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 FAM25CB3EWG5 89 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 FAM25GB3EWG6 89 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 TBX3O15119 743 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 PRKAA2P54646 552 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 MASTLQ96GX5 879 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 COQ7Q99807 217 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 FNDC3AQ9Y2H6 1198 aaKnown RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 TCHHQ07283 1943 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 KIF20BQ96Q89 1820 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 E2F7Q96AV8 911 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 MLXIPLQ9NP71 852 aa11.78□□□□□ -0.52
GCN1-201ENST00000300648 TUBA8Q9NY65 449 aaPredicted RBP11.78□□□□□ -0.52
GCN1-201ENST00000300648 MED26O95402 600 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 MTA1Q13330 715 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 TTLL4Q14679 1199 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 RCN1Q15293 331 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 SYTL3Q4VX76 610 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 WDR24Q96S15 920 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 DHX35Q9H5Z1 703 aaKnown RBP11.77□□□□□ -0.52
GCN1-201ENST00000300648 NEXMIFQ5QGS0 1516 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 B2RBV5 119 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 NAPEPLDQ6IQ20 393 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 CYP4Z1Q86W10 505 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 TRPC7Q9HCX4 862 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 RWDD3Q9Y3V2 267 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 RAD54BQ9Y620 910 aa11.77□□□□□ -0.52
GCN1-201ENST00000300648 MYO1GB0I1T2 1018 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 NDUFS3O75489 264 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 ABCB1P08183 1280 aaPredicted RBP11.77□□□□□ -0.53
GCN1-201ENST00000300648 SNAP25P60880 206 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 AGAP9Q5VTM2 703 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 PPP2R3CQ969Q6 453 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
GCN1-201ENST00000300648 PABPC3Q9H361 631 aaKnown RBP11.77□□□□□ -0.53
GCN1-201ENST00000300648 SMARCAD1Q9H4L7 1026 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 FKBP9O95302 570 aa11.77□□□□□ -0.53
GCN1-201ENST00000300648 NQO1P15559 274 aaKnown RBP11.77□□□□□ -0.53
GCN1-201ENST00000300648 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.53
GCN1-201ENST00000300648 DALRD3Q5D0E6 543 aaKnown RBP11.77□□□□□ -0.53
GCN1-201ENST00000300648 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms